Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AC006329.2-201ENST00000611491 394 ntBASIC5.54□□□□□ -1.52
USPL1Q5W0Q7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
USPL1Q5W0Q7 AC133104.2-201ENST00000615272 193 ntBASIC5.54□□□□□ -1.52
USPL1Q5W0Q7 AL158196.1-201ENST00000616786 434 ntBASIC5.54□□□□□ -1.52
USPL1Q5W0Q7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.54□□□□□ -1.52
USPL1Q5W0Q7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USPL1Q5W0Q7 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.54□□□□□ -1.52
USPL1Q5W0Q7 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USPL1Q5W0Q7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USPL1Q5W0Q7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
USPL1Q5W0Q7 AC139769.1-204ENST00000472297 1931 ntBASIC5.54□□□□□ -1.52
USPL1Q5W0Q7 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.54□□□□□ -1.52
USPL1Q5W0Q7 PABPC1P7-201ENST00000413177 1513 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 MTND5P10-201ENST00000603719 1809 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 RNA5SP513-201ENST00000364648 118 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 Y_RNA.459-201ENST00000384251 102 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 SOD2P1-201ENST00000396543 562 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 AL360182.1-201ENST00000397433 468 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 MIR1250-201ENST00000408098 113 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 RNU6-370P-201ENST00000411008 104 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 AC098591.2-201ENST00000510152 315 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 AC093303.1-201ENST00000514549 295 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 RNU6-1038P-201ENST00000516516 104 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 RNU6-256P-201ENST00000516747 97 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 RN7SKP277-201ENST00000516895 283 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 RNA5SP454-201ENST00000517231 127 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 FTH1P11-201ENST00000517577 551 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 AC103783.1-201ENST00000520506 373 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 MIR4790-201ENST00000577799 79 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 MIR4286-201ENST00000580651 93 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 AL354984.3-201ENST00000604803 325 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 AL445363.3-201ENST00000623080 671 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 MIR4496-201ENST00000635896 61 ntBASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USPL1Q5W0Q7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 AC090229.1-201ENST00000590983 1609 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 AL359893.1-201ENST00000447628 1580 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 RNA5SP151-201ENST00000365632 117 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 RNU6-463P-201ENST00000384340 107 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 RNA5SP36-201ENST00000410197 133 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 RNU4-65P-201ENST00000410473 140 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 RPL30P3-201ENST00000424262 333 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 RPL7P2-201ENST00000427639 268 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 COX6B1P7-201ENST00000430845 235 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 HMGB3P11-201ENST00000440127 604 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 AL358232.1-201ENST00000448030 501 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 HMGB3P22-202ENST00000451823 572 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 RNA5SP103-201ENST00000459503 118 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 RPL21P8-201ENST00000465083 535 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 RN7SKP24-201ENST00000515888 284 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 RNU6-189P-201ENST00000516120 101 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 RNU6-988P-201ENST00000519081 107 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 CR383656.7-201ENST00000548164 174 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 RN7SL703P-201ENST00000578485 302 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 AC023043.2-201ENST00000589678 1026 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 RPL7P50-201ENST00000600588 727 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 AC006254.3-201ENST00000603353 884 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 AC092747.3-201ENST00000603769 301 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 AL121655.1-201ENST00000605811 308 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 SNHG22-203ENST00000617833 660 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 AC103705.1-201ENST00000619013 241 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 AC138305.3-201ENST00000624988 240 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms