Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 RNY1P12-201ENST00000364251 105 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 SNORA62-201ENST00000365493 153 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 RNU6-517P-201ENST00000384362 110 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 MIR199A2-201ENST00000385289 110 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AC009237.5-201ENST00000414271 501 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 ARF4P2-201ENST00000430209 526 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 RPL23AP30-201ENST00000432419 501 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 MTND1P4-201ENST00000435196 415 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 MTATP6P30-201ENST00000443540 664 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 RPS3AP14-201ENST00000483907 780 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AC105137.1-201ENST00000484355 562 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 CEACAMP10-202ENST00000495431 496 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 RNU6-506P-201ENST00000516553 94 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AP003730.1-201ENST00000524605 285 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 FAM92A1P1-201ENST00000528023 890 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AL121576.1-201ENST00000556055 276 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 MIR3138-201ENST00000585238 82 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AC007687.1-201ENST00000602704 304 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AL391646.1-201ENST00000603860 190 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AL137849.1-201ENST00000604767 169 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AL158209.2-201ENST00000619266 216 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 AC026585.1-201ENST00000619582 524 ntBASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RUNDC3AQ59EK9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 AC027514.1-201ENST00000588561 1603 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 DEFB108F-201ENST00000344638 222 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 RNU4-55P-201ENST00000410731 137 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 RNU2-71P-201ENST00000411395 189 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 AC008850.1-201ENST00000427546 362 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 AC073464.1-201ENST00000429823 534 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 C8orf59P1-201ENST00000429930 303 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 OR2B8P-201ENST00000432841 938 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 NUTF2P3-201ENST00000448540 384 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 HMGN2P7-201ENST00000456186 273 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 RPL23AP14-201ENST00000468281 468 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 RPS27AP1-201ENST00000475545 471 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 RNU2-10P-201ENST00000516375 211 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 SUB1P2-201ENST00000556401 297 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 AC020910.2-201ENST00000603635 610 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 AF250324.2-201ENST00000608299 610 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 SDR42E1P2-201ENST00000614861 481 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 AC010133.1-201ENST00000615809 842 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 AC124864.2-201ENST00000624736 186 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 OR52H1-202ENST00000641796 1061 ntBASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RUNDC3AQ59EK9 AC116096.1-201ENST00000566804 2314 ntBASIC3.62□□□□□ -1.83
RUNDC3AQ59EK9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
RUNDC3AQ59EK9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
RUNDC3AQ59EK9 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.62□□□□□ -1.83
RUNDC3AQ59EK9 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RUNDC3AQ59EK9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RUNDC3AQ59EK9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.62□□□□□ -1.83
RUNDC3AQ59EK9 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RUNDC3AQ59EK9 Y_RNA.6-201ENST00000362350 114 ntBASIC3.62□□□□□ -1.83
RUNDC3AQ59EK9 Y_RNA.159-201ENST00000363674 87 ntBASIC3.62□□□□□ -1.83
RUNDC3AQ59EK9 SNORD6-201ENST00000365444 73 ntBASIC3.62□□□□□ -1.83
RUNDC3AQ59EK9 RNU5E-6P-201ENST00000365574 115 ntBASIC3.62□□□□□ -1.83
RUNDC3AQ59EK9 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms