Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RPL7P8-201ENST00000411964 730 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.08□□□□□ -1.92
SCN1BQ07699 HSFY4P-201ENST00000415994 1181 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 AL353678.1-201ENST00000422735 741 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.08□□□□□ -1.92
SCN1BQ07699 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.08□□□□□ -1.92
SCN1BQ07699 AL512649.1-201ENST00000428997 581 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 AC109583.1-201ENST00000432156 268 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 HMGB3P11-201ENST00000440127 604 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.08□□□□□ -1.92
SCN1BQ07699 AC108059.3-201ENST00000456388 214 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 RNU7-23P-201ENST00000459465 62 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 RPL7P5-201ENST00000471472 736 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 AC068587.2-201ENST00000478386 781 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 DSTNP2-201ENST00000504533 515 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.08□□□□□ -1.92
SCN1BQ07699 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.08□□□□□ -1.92
SCN1BQ07699 RNU6-1129P-201ENST00000515964 104 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.08□□□□□ -1.92
SCN1BQ07699 ATP5F1P5-201ENST00000526403 760 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.08□□□□□ -1.92
SCN1BQ07699 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.08□□□□□ -1.92
SCN1BQ07699 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.08□□□□□ -1.92
SCN1BQ07699 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.08□□□□□ -1.92
SCN1BQ07699 AC007954.1-201ENST00000554198 494 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.08□□□□□ -1.92
SCN1BQ07699 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.08□□□□□ -1.92
SCN1BQ07699 MIR5685-201ENST00000579080 79 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 AC006504.3-201ENST00000586818 523 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 AP000403.1-201ENST00000603349 851 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 AC136601.2-201ENST00000604356 474 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 AC245517.5-201ENST00000611529 162 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 AC004852.3-201ENST00000614131 326 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.08□□□□□ -1.92
SCN1BQ07699 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.08□□□□□ -1.92
SCN1BQ07699 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.08□□□□□ -1.92
SCN1BQ07699 AP000553.6-201ENST00000641242 118 ntBASIC3.08□□□□□ -1.92
SCN1BQ07699 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SCN1BQ07699 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SCN1BQ07699 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SCN1BQ07699 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SCN1BQ07699 RN7SKP227-201ENST00000364445 330 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 RPL21P3-201ENST00000395517 478 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 RPS20P2-201ENST00000402520 389 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SCN1BQ07699 AL445189.1-201ENST00000405722 338 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.07□□□□□ -1.92
SCN1BQ07699 SDCBPP3-201ENST00000419629 891 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.07□□□□□ -1.92
SCN1BQ07699 AC004975.1-201ENST00000428733 208 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.07□□□□□ -1.92
SCN1BQ07699 RPL37P21-201ENST00000435890 276 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.07□□□□□ -1.92
SCN1BQ07699 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.07□□□□□ -1.92
SCN1BQ07699 AC146507.2-201ENST00000460608 476 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 AC023598.1-201ENST00000472521 361 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 AL160314.1-201ENST00000490836 438 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 RPS27P26-201ENST00000494583 239 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.07□□□□□ -1.92
SCN1BQ07699 AC114797.1-201ENST00000514003 728 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.07□□□□□ -1.92
SCN1BQ07699 RNA5SP290-201ENST00000517133 127 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.07□□□□□ -1.92
SCN1BQ07699 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.07□□□□□ -1.92
SCN1BQ07699 AC100870.1-201ENST00000522035 505 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SCN1BQ07699 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.07□□□□□ -1.92
SCN1BQ07699 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.07□□□□□ -1.92
SCN1BQ07699 AC123904.2-201ENST00000548059 300 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 AL391261.3-201ENST00000557194 520 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.07□□□□□ -1.92
SCN1BQ07699 AC087499.8-201ENST00000578406 226 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.07□□□□□ -1.92
SCN1BQ07699 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.07□□□□□ -1.92
SCN1BQ07699 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 AC004832.5-201ENST00000608677 401 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 AL391813.2-201ENST00000609113 322 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 AC108747.1-201ENST00000609508 535 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 AC090970.3-201ENST00000612566 866 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.07□□□□□ -1.92
SCN1BQ07699 AC068880.5-201ENST00000624331 290 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
SCN1BQ07699 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.07□□□□□ -1.92
SCN1BQ07699 AC008264.2-201ENST00000610193 3731 ntBASIC3.07□□□□□ -1.92
SCN1BQ07699 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SCN1BQ07699 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SCN1BQ07699 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 RNU6-500P-201ENST00000362349 107 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SCN1BQ07699 DYNLT3P1-201ENST00000378574 347 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 RPL7P60-201ENST00000397636 735 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 RPL7P25-201ENST00000404151 721 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SCN1BQ07699 ATG3P1-201ENST00000419507 911 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.06□□□□□ -1.92
SCN1BQ07699 HMGN2P30-201ENST00000423237 256 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 RPL7P37-201ENST00000425095 738 ntBASIC3.06□□□□□ -1.92
SCN1BQ07699 FCF1P1-201ENST00000432690 571 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms