Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CKAP4Q07065 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.73□□□□□ -1.97
CKAP4Q07065 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 AL022400.1-201ENST00000423946 935 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 AC234781.2-201ENST00000426370 994 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.73□□□□□ -1.97
CKAP4Q07065 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.73□□□□□ -1.97
CKAP4Q07065 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.73□□□□□ -1.97
CKAP4Q07065 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.73□□□□□ -1.97
CKAP4Q07065 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.73□□□□□ -1.97
CKAP4Q07065 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.73□□□□□ -1.97
CKAP4Q07065 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.73□□□□□ -1.97
CKAP4Q07065 RNU7-125P-201ENST00000458760 62 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 AC013828.1-201ENST00000481845 158 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 RPF2P2-201ENST00000504693 896 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 OR5BM1P-201ENST00000512021 366 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 RNU6-232P-201ENST00000517144 64 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.73□□□□□ -1.97
CKAP4Q07065 AP003385.6-201ENST00000531603 374 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.73□□□□□ -1.97
CKAP4Q07065 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.73□□□□□ -1.97
CKAP4Q07065 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.73□□□□□ -1.97
CKAP4Q07065 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.73□□□□□ -1.97
CKAP4Q07065 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.73□□□□□ -1.97
CKAP4Q07065 COX6CP3-201ENST00000580869 223 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.73□□□□□ -1.97
CKAP4Q07065 DUXAP4-201ENST00000603046 613 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 Z94722.1-201ENST00000604328 474 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 AC018714.1-201ENST00000605028 208 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 AP001521.1-201ENST00000609150 300 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 AC245297.2-201ENST00000610119 565 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 AL137847.3-201ENST00000611521 109 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.73□□□□□ -1.97
CKAP4Q07065 AC004223.4-201ENST00000612426 332 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 AL136981.2-201ENST00000617319 734 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 AP003122.6-201ENST00000623831 495 ntBASIC2.73□□□□□ -1.97
CKAP4Q07065 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.73□□□□□ -1.97
CKAP4Q07065 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.73□□□□□ -1.97
CKAP4Q07065 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.73□□□□□ -1.97
CKAP4Q07065 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CKAP4Q07065 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.72□□□□□ -1.97
CKAP4Q07065 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CKAP4Q07065 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CKAP4Q07065 SNRPEP3-201ENST00000338402 276 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 RNU6-553P-201ENST00000364047 96 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 RNA5SP267-201ENST00000364893 126 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 SNORD116-1-201ENST00000384335 95 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 MIR649-201ENST00000384843 97 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 RAB28P1-201ENST00000411517 641 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.72□□□□□ -1.97
CKAP4Q07065 ATG3P1-201ENST00000419507 911 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 OFD1P18Y-201ENST00000420889 959 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.72□□□□□ -1.97
CKAP4Q07065 RPL36P19-201ENST00000430744 301 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.72□□□□□ -1.97
CKAP4Q07065 RPL23AP58-201ENST00000440453 469 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.72□□□□□ -1.97
CKAP4Q07065 MTND2P19-201ENST00000449129 1012 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 TRGVB-201ENST00000453257 471 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 MTCO3P11-201ENST00000455103 774 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.72□□□□□ -1.97
CKAP4Q07065 AC133134.1-201ENST00000466800 359 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 BZW1P2-201ENST00000473537 826 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 RNF138P1-201ENST00000502765 546 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.72□□□□□ -1.97
CKAP4Q07065 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.72□□□□□ -1.97
CKAP4Q07065 RNY4P37-201ENST00000516225 96 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.72□□□□□ -1.97
CKAP4Q07065 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.72□□□□□ -1.97
CKAP4Q07065 CKS1BP7-201ENST00000522230 235 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.72□□□□□ -1.97
CKAP4Q07065 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.72□□□□□ -1.97
CKAP4Q07065 AC090502.2-201ENST00000549267 280 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.72□□□□□ -1.97
CKAP4Q07065 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.72□□□□□ -1.97
CKAP4Q07065 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.72□□□□□ -1.97
CKAP4Q07065 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.72□□□□□ -1.97
CKAP4Q07065 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.72□□□□□ -1.97
CKAP4Q07065 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.72□□□□□ -1.97
CKAP4Q07065 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.72□□□□□ -1.97
CKAP4Q07065 PIGPP4-201ENST00000584447 307 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 AL669831.4-202ENST00000590817 238 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 VN1R92P-201ENST00000598511 928 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 AC010620.1-201ENST00000601088 1102 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 BX323046.1-201ENST00000610145 535 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CKAP4Q07065 CYP3A51P-201ENST00000633513 256 ntBASIC2.72□□□□□ -1.97
CKAP4Q07065 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.72□□□□□ -1.97
CKAP4Q07065 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CKAP4Q07065 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.72□□□□□ -1.97
CKAP4Q07065 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.72□□□□□ -1.97
CKAP4Q07065 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
CKAP4Q07065 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.71□□□□□ -1.97
CKAP4Q07065 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
CKAP4Q07065 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
CKAP4Q07065 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.71□□□□□ -1.98
CKAP4Q07065 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CKAP4Q07065 AC233263.6-201ENST00000631132 1963 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 SNORA4.1-201ENST00000364263 144 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms