Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 Y_RNA.465-201ENST00000384293 102 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 RNU6-906P-201ENST00000384700 70 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 RPL23AP29-201ENST00000397284 453 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HMGCS1Q01581 RPL19P1-201ENST00000411635 428 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 RAP1BP1-201ENST00000412709 553 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.53□□□□□ -2
HMGCS1Q01581 TIMM9P2-201ENST00000419324 266 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.53□□□□□ -2
HMGCS1Q01581 HMGN2P30-201ENST00000423237 256 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 USP9YP24-201ENST00000434374 697 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.53□□□□□ -2
HMGCS1Q01581 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 USP9YP17-201ENST00000444617 696 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 UBBP3-201ENST00000445497 241 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.53□□□□□ -2
HMGCS1Q01581 OR6K5P-201ENST00000447050 945 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.53□□□□□ -2
HMGCS1Q01581 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.53□□□□□ -2
HMGCS1Q01581 USP9YP25-201ENST00000457708 443 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.53□□□□□ -2
HMGCS1Q01581 AC098799.2-201ENST00000509466 868 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 AC116353.3-201ENST00000511215 249 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.53□□□□□ -2
HMGCS1Q01581 AC006499.2-201ENST00000513470 337 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 AC093677.1-201ENST00000514414 678 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 SNORA31.21-201ENST00000517180 77 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.53□□□□□ -2
HMGCS1Q01581 AC022861.1-201ENST00000522981 663 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.53□□□□□ -2
HMGCS1Q01581 OR7K1P-201ENST00000546439 926 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 AC123904.3-201ENST00000547218 814 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.53□□□□□ -2
HMGCS1Q01581 NBEAP1-201ENST00000554452 979 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.53□□□□□ -2
HMGCS1Q01581 MTND1P8-201ENST00000571424 950 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 OR4K8P-201ENST00000578842 1048 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 AC138761.3-201ENST00000579993 334 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.53□□□□□ -2
HMGCS1Q01581 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.53□□□□□ -2
HMGCS1Q01581 VN1R92P-201ENST00000598511 928 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.53□□□□□ -2
HMGCS1Q01581 AL133507.1-201ENST00000605269 557 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 AC022960.3-201ENST00000619794 441 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 AL356585.4-201ENST00000623078 1229 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 AL078595.3-201ENST00000623815 1166 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 LRRC77P-213ENST00000637727 880 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.53□□□□□ -2
HMGCS1Q01581 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HMGCS1Q01581 AC138915.1-201ENST00000565427 1685 ntBASIC2.53□□□□□ -2
HMGCS1Q01581 RNU6-1155P-201ENST00000363554 107 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 RNU6-173P-201ENST00000364215 104 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 RNU1-109P-201ENST00000383960 147 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 Y_RNA.548-201ENST00000384656 105 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 MIR135A2-201ENST00000384854 100 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HMGCS1Q01581 U3.26-201ENST00000391236 204 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 MTATP6P27-201ENST00000416987 621 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
HMGCS1Q01581 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.52□□□□□ -2.01
HMGCS1Q01581 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.52□□□□□ -2.01
HMGCS1Q01581 PTENP1-201ENST00000447117 1215 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.52□□□□□ -2.01
HMGCS1Q01581 RPL21P134-201ENST00000453468 483 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 RNU7-136P-201ENST00000458819 69 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 MTND1P16-201ENST00000465177 898 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HMGCS1Q01581 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HMGCS1Q01581 AC114981.1-201ENST00000503897 678 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.52□□□□□ -2.01
HMGCS1Q01581 AC079395.1-201ENST00000510981 262 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 RN7SKP132-201ENST00000516001 208 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.52□□□□□ -2.01
HMGCS1Q01581 CR383656.7-201ENST00000548164 174 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 GTF3AP2-201ENST00000557014 266 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.52□□□□□ -2.01
HMGCS1Q01581 AL512347.1-201ENST00000566420 503 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.52□□□□□ -2.01
HMGCS1Q01581 OR4K7P-201ENST00000580232 945 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 HSPE1P7-201ENST00000604681 321 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 AL137843.1-201ENST00000605078 385 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 AL390208.1-201ENST00000605885 644 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 AC080013.4-201ENST00000607624 649 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 AL359198.2-201ENST00000611836 194 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 AC006386.1-201ENST00000619436 415 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 AC109809.1-201ENST00000619665 545 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.52□□□□□ -2.01
HMGCS1Q01581 AC231657.1-201ENST00000624313 397 ntBASIC2.52□□□□□ -2.01
HMGCS1Q01581 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.52□□□□□ -2.01
HMGCS1Q01581 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.52□□□□□ -2.01
HMGCS1Q01581 AL022578.1-201ENST00000439330 1433 ntBASIC2.51□□□□□ -2.01
HMGCS1Q01581 OR4G11P-202ENST00000642116 1414 ntBASIC2.51□□□□□ -2.01
HMGCS1Q01581 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
HMGCS1Q01581 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HMGCS1Q01581 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.51□□□□□ -2.01
HMGCS1Q01581 AC097714.1-201ENST00000511272 1647 ntBASIC2.51□□□□□ -2.01
HMGCS1Q01581 RNA5SP139-201ENST00000364340 117 ntBASIC2.51□□□□□ -2.01
HMGCS1Q01581 RNU6-343P-201ENST00000364709 104 ntBASIC2.51□□□□□ -2.01
HMGCS1Q01581 RNU6-636P-201ENST00000384598 107 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms