Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL135786.1-201ENST00000415892 214 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 MTND1P23-201ENST00000416931 372 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 Z75741.2-201ENST00000417272 1167 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 AC098614.2-201ENST00000426040 255 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
H3F3AP84243 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
H3F3AP84243 RPL23AP23-201ENST00000452590 471 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.96□□□□□ -2.1
H3F3AP84243 AC010486.1-201ENST00000511793 424 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 TTC39CP1-201ENST00000512513 755 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 AC008549.1-201ENST00000512900 643 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 IGJP1-201ENST00000522682 475 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.96□□□□□ -2.1
H3F3AP84243 NDUFS5P6-201ENST00000529136 295 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 AC012414.2-201ENST00000559474 187 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 AC023824.2-201ENST00000566185 400 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 AGGF1P5-201ENST00000567900 919 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 MIR3921-201ENST00000577308 85 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 GAS5-AS1-201ENST00000602767 694 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 AL592148.2-201ENST00000612210 372 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 AC090772.4-201ENST00000623599 362 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 AC064859.1-201ENST00000624741 174 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.96□□□□□ -2.1
H3F3AP84243 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
H3F3AP84243 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.96□□□□□ -2.1
H3F3AP84243 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
H3F3AP84243 ELF2P3-201ENST00000445099 1506 ntBASIC1.96□□□□□ -2.1
H3F3AP84243 MTND4P1-201ENST00000457501 1466 ntBASIC1.95□□□□□ -2.1
H3F3AP84243 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
H3F3AP84243 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
H3F3AP84243 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
H3F3AP84243 AL596028.1-201ENST00000326971 197 ntBASIC1.95□□□□□ -2.1
H3F3AP84243 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
H3F3AP84243 RNU6-1035P-201ENST00000384477 107 ntBASIC1.95□□□□□ -2.1
H3F3AP84243 MIR1290-201ENST00000408735 78 ntBASIC1.95□□□□□ -2.1
H3F3AP84243 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.95□□□□□ -2.1
H3F3AP84243 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.95□□□□□ -2.1
H3F3AP84243 AL513331.1-201ENST00000411908 397 ntBASIC1.95□□□□□ -2.1
H3F3AP84243 HMGB1P11-201ENST00000413899 637 ntBASIC1.95□□□□□ -2.1
H3F3AP84243 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.95□□□□□ -2.1
H3F3AP84243 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.95□□□□□ -2.1
H3F3AP84243 AL139413.1-201ENST00000421309 217 ntBASIC1.95□□□□□ -2.1
H3F3AP84243 GTF2IP20-201ENST00000431663 360 ntBASIC1.95□□□□□ -2.1
H3F3AP84243 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.95□□□□□ -2.1
H3F3AP84243 AL118520.1-201ENST00000450770 291 ntBASIC1.95□□□□□ -2.1
H3F3AP84243 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.95□□□□□ -2.1
H3F3AP84243 Z82190.1-201ENST00000454534 490 ntBASIC1.95□□□□□ -2.1
H3F3AP84243 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.95□□□□□ -2.1
H3F3AP84243 MTCO3P2-201ENST00000457365 171 ntBASIC1.95□□□□□ -2.1
H3F3AP84243 AC104435.1-201ENST00000483483 166 ntBASIC1.95□□□□□ -2.1
H3F3AP84243 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.95□□□□□ -2.1
H3F3AP84243 AC090255.1-201ENST00000495779 349 ntBASIC1.95□□□□□ -2.1
H3F3AP84243 SCARNA16.3-201ENST00000516595 184 ntBASIC1.95□□□□□ -2.1
H3F3AP84243 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.95□□□□□ -2.1
H3F3AP84243 AP000889.1-201ENST00000530968 660 ntBASIC1.95□□□□□ -2.1
H3F3AP84243 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.95□□□□□ -2.1
H3F3AP84243 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.95□□□□□ -2.1
H3F3AP84243 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.95□□□□□ -2.1
H3F3AP84243 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.95□□□□□ -2.1
H3F3AP84243 AC009127.3-201ENST00000570531 403 ntBASIC1.95□□□□□ -2.1
H3F3AP84243 MIR4435-1-201ENST00000582552 80 ntBASIC1.95□□□□□ -2.1
H3F3AP84243 RPS15AP11-201ENST00000594193 385 ntBASIC1.95□□□□□ -2.1
H3F3AP84243 MTCO1P6-201ENST00000481192 1384 ntBASIC1.95□□□□□ -2.1
H3F3AP84243 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
H3F3AP84243 SNORD115-48-201ENST00000364764 76 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
H3F3AP84243 SNORA51.11-201ENST00000384442 131 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 AL121978.1-201ENST00000402778 359 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 AL133384.1-201ENST00000412744 351 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 Z98742.3-201ENST00000418637 326 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 AC099548.1-201ENST00000421443 426 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 AL009174.1-201ENST00000426577 416 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.94□□□□□ -2.1
H3F3AP84243 AC093422.3-201ENST00000428506 305 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 AL035407.1-201ENST00000429211 571 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.94□□□□□ -2.1
H3F3AP84243 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.94□□□□□ -2.1
H3F3AP84243 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.94□□□□□ -2.1
H3F3AP84243 AC008427.1-201ENST00000503102 655 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 AC008413.1-201ENST00000511864 177 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 RPL23AP94-201ENST00000512518 302 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.94□□□□□ -2.1
H3F3AP84243 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.94□□□□□ -2.1
H3F3AP84243 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
H3F3AP84243 MIR1273D-201ENST00000577266 86 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 MIR3616-201ENST00000584070 92 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 AC015688.2-201ENST00000584523 262 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 AC105224.1-201ENST00000587055 421 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 AL020997.3-201ENST00000602843 359 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 SNORD14A-201ENST00000606526 91 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 AC107294.1-201ENST00000609524 467 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 MIR6132-201ENST00000622083 109 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 AL356585.4-201ENST00000623078 1229 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
H3F3AP84243 AC012640.5-201ENST00000623897 319 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.94□□□□□ -2.1
H3F3AP84243 AP003399.1-201ENST00000637534 361 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.94□□□□□ -2.1
H3F3AP84243 AL137003.2-201ENST00000606924 2538 ntBASIC1.94□□□□□ -2.1
H3F3AP84243 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms