Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 OR4K11P-201ENST00000431829 904 ntBASIC2.66□□□□□ -1.98
PKNOX1P55347 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.66□□□□□ -1.98
PKNOX1P55347 EEF1E1P1-201ENST00000446998 430 ntBASIC2.66□□□□□ -1.98
PKNOX1P55347 AL592447.1-201ENST00000447592 540 ntBASIC2.66□□□□□ -1.98
PKNOX1P55347 AC092155.2-201ENST00000454675 477 ntBASIC2.66□□□□□ -1.98
PKNOX1P55347 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.66□□□□□ -1.98
PKNOX1P55347 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.66□□□□□ -1.98
PKNOX1P55347 RPL7P49-201ENST00000471402 708 ntBASIC2.66□□□□□ -1.98
PKNOX1P55347 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.66□□□□□ -1.98
PKNOX1P55347 AP001025.2-201ENST00000490908 477 ntBASIC2.66□□□□□ -1.98
PKNOX1P55347 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.66□□□□□ -1.98
PKNOX1P55347 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PKNOX1P55347 AL359273.1-201ENST00000510918 627 ntBASIC2.66□□□□□ -1.98
PKNOX1P55347 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.66□□□□□ -1.98
PKNOX1P55347 RNU6-798P-201ENST00000516912 103 ntBASIC2.66□□□□□ -1.98
PKNOX1P55347 AP003497.1-201ENST00000528472 562 ntBASIC2.66□□□□□ -1.98
PKNOX1P55347 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.66□□□□□ -1.98
PKNOX1P55347 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.66□□□□□ -1.98
PKNOX1P55347 AC004486.1-201ENST00000546846 233 ntBASIC2.66□□□□□ -1.98
PKNOX1P55347 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.66□□□□□ -1.98
PKNOX1P55347 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.66□□□□□ -1.98
PKNOX1P55347 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.66□□□□□ -1.98
PKNOX1P55347 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.66□□□□□ -1.98
PKNOX1P55347 AL133445.2-201ENST00000611191 527 ntBASIC2.66□□□□□ -1.98
PKNOX1P55347 AC090132.2-201ENST00000615881 347 ntBASIC2.66□□□□□ -1.98
PKNOX1P55347 MIR8057-201ENST00000620957 69 ntBASIC2.66□□□□□ -1.98
PKNOX1P55347 AC008568.2-201ENST00000623862 2313 ntBASIC2.66□□□□□ -1.98
PKNOX1P55347 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PKNOX1P55347 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PKNOX1P55347 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PKNOX1P55347 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
PKNOX1P55347 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
PKNOX1P55347 RNU6-777P-201ENST00000364265 104 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 RNU6-906P-201ENST00000384700 70 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
PKNOX1P55347 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
PKNOX1P55347 SNORA48.7-201ENST00000391302 135 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 HMGN2P35-201ENST00000412164 270 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 BX682237.1-201ENST00000415016 335 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.65□□□□□ -1.99
PKNOX1P55347 PPP1R11P2-201ENST00000423543 382 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.65□□□□□ -1.99
PKNOX1P55347 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.65□□□□□ -1.99
PKNOX1P55347 USP9YP24-201ENST00000434374 697 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 USP9YP17-201ENST00000444617 696 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.65□□□□□ -1.99
PKNOX1P55347 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.65□□□□□ -1.99
PKNOX1P55347 ST13P20-201ENST00000447996 1065 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.65□□□□□ -1.99
PKNOX1P55347 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.65□□□□□ -1.99
PKNOX1P55347 MEMO1P3-201ENST00000459811 302 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 RPS29P12-201ENST00000460178 152 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 AL049714.1-201ENST00000466686 347 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 AC108729.1-201ENST00000487812 947 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.65□□□□□ -1.99
PKNOX1P55347 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.65□□□□□ -1.99
PKNOX1P55347 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PKNOX1P55347 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.65□□□□□ -1.99
PKNOX1P55347 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.65□□□□□ -1.99
PKNOX1P55347 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.65□□□□□ -1.99
PKNOX1P55347 RPP40P2-201ENST00000603596 712 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 AC011451.2-201ENST00000604303 598 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 AC080013.3-201ENST00000606839 578 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 AL158211.4-201ENST00000606988 584 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 AC092953.2-201ENST00000608000 699 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 AC004067.1-201ENST00000608733 700 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 AC008443.7-201ENST00000622195 246 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 AC027309.3-201ENST00000623419 351 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
PKNOX1P55347 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.65□□□□□ -1.99
PKNOX1P55347 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.99
PKNOX1P55347 AC099654.7-201ENST00000635788 2127 ntBASIC2.65□□□□□ -1.99
PKNOX1P55347 DDX43P2-201ENST00000604753 1354 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 AP000776.1-201ENST00000530032 1663 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
PKNOX1P55347 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PKNOX1P55347 RNU5E-8P-201ENST00000363502 116 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 RNU1-140P-201ENST00000365040 165 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 RNU6-359P-201ENST00000365466 108 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.64□□□□□ -1.99
PKNOX1P55347 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
PKNOX1P55347 RNU6-1197P-201ENST00000391183 107 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 EEF1A1P41-201ENST00000414667 207 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 ELOCP9-201ENST00000418624 239 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 AC106883.1-201ENST00000418805 562 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 RPL35AP12-201ENST00000425362 338 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 AL139132.1-201ENST00000431587 344 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 AC092573.2-201ENST00000434546 243 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.64□□□□□ -1.99
PKNOX1P55347 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.64□□□□□ -1.99
PKNOX1P55347 AL671855.1-201ENST00000446875 1203 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
PKNOX1P55347 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.64□□□□□ -1.99
PKNOX1P55347 AC234775.1-201ENST00000454247 670 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.64□□□□□ -1.99
PKNOX1P55347 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 AL031183.1-201ENST00000457667 207 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.64□□□□□ -1.99
PKNOX1P55347 RPS29P26-201ENST00000477483 171 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms