Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RPS4XP8-201ENST00000402039 771 ntBASIC3.51□□□□□ -1.85
CDH12P55289 AL391417.1-201ENST00000404100 426 ntBASIC3.51□□□□□ -1.85
CDH12P55289 RPS3AP24-201ENST00000407896 734 ntBASIC3.51□□□□□ -1.85
CDH12P55289 RN7SKP159-201ENST00000410657 292 ntBASIC3.51□□□□□ -1.85
CDH12P55289 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CDH12P55289 TOMM22P1-201ENST00000418578 312 ntBASIC3.51□□□□□ -1.85
CDH12P55289 AC099677.1-201ENST00000420575 175 ntBASIC3.51□□□□□ -1.85
CDH12P55289 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.51□□□□□ -1.85
CDH12P55289 FAR2P4-202ENST00000425399 584 ntBASIC3.51□□□□□ -1.85
CDH12P55289 AC079780.1-201ENST00000428259 207 ntBASIC3.51□□□□□ -1.85
CDH12P55289 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDH12P55289 AL138799.3-201ENST00000438968 350 ntBASIC3.51□□□□□ -1.85
CDH12P55289 AL662791.1-201ENST00000441992 928 ntBASIC3.51□□□□□ -1.85
CDH12P55289 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH12P55289 AC016696.1-201ENST00000446949 318 ntBASIC3.51□□□□□ -1.85
CDH12P55289 NFU1P2-201ENST00000448700 469 ntBASIC3.51□□□□□ -1.85
CDH12P55289 SNRPGP5-201ENST00000456003 220 ntBASIC3.51□□□□□ -1.85
CDH12P55289 AC027673.1-201ENST00000456245 405 ntBASIC3.51□□□□□ -1.85
CDH12P55289 AC026979.1-201ENST00000492525 396 ntBASIC3.51□□□□□ -1.85
CDH12P55289 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH12P55289 RAC1P2-201ENST00000511164 579 ntBASIC3.51□□□□□ -1.85
CDH12P55289 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.51□□□□□ -1.85
CDH12P55289 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH12P55289 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH12P55289 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH12P55289 AL157687.1-201ENST00000554853 619 ntBASIC3.51□□□□□ -1.85
CDH12P55289 BNIP3P5-201ENST00000562290 498 ntBASIC3.51□□□□□ -1.85
CDH12P55289 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH12P55289 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.51□□□□□ -1.85
CDH12P55289 AC025678.1-201ENST00000567861 338 ntBASIC3.51□□□□□ -1.85
CDH12P55289 MIR4700-201ENST00000578311 74 ntBASIC3.51□□□□□ -1.85
CDH12P55289 AC105224.1-201ENST00000587055 421 ntBASIC3.51□□□□□ -1.85
CDH12P55289 AC098848.2-201ENST00000588023 330 ntBASIC3.51□□□□□ -1.85
CDH12P55289 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.51□□□□□ -1.85
CDH12P55289 AC104458.1-201ENST00000608243 463 ntBASIC3.51□□□□□ -1.85
CDH12P55289 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.51□□□□□ -1.85
CDH12P55289 MIR1321-201ENST00000637766 79 ntBASIC3.51□□□□□ -1.85
CDH12P55289 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDH12P55289 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH12P55289 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH12P55289 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH12P55289 AC010733.2-201ENST00000589496 5702 ntBASIC3.51□□□□□ -1.85
CDH12P55289 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDH12P55289 OTUD4P1-201ENST00000237841 3067 ntBASIC3.5□□□□□ -1.85
CDH12P55289 AL353746.1-201ENST00000566293 6881 ntBASIC3.5□□□□□ -1.85
CDH12P55289 RPS4XP5-202ENST00000449995 1334 ntBASIC3.5□□□□□ -1.85
CDH12P55289 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDH12P55289 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
CDH12P55289 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CDH12P55289 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.5□□□□□ -1.85
CDH12P55289 RNU6-1097P-201ENST00000363586 107 ntBASIC3.5□□□□□ -1.85
CDH12P55289 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CDH12P55289 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH12P55289 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDH12P55289 Y_RNA.390-201ENST00000383932 102 ntBASIC3.5□□□□□ -1.85
CDH12P55289 SNORD3H-201ENST00000384486 214 ntBASIC3.5□□□□□ -1.85
CDH12P55289 SNORA70C-201ENST00000384538 135 ntBASIC3.5□□□□□ -1.85
CDH12P55289 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CDH12P55289 RNA5SP317-201ENST00000410176 116 ntBASIC3.5□□□□□ -1.85
CDH12P55289 RNU2-9P-201ENST00000410194 145 ntBASIC3.5□□□□□ -1.85
CDH12P55289 RNU2-43P-201ENST00000410306 190 ntBASIC3.5□□□□□ -1.85
CDH12P55289 RNU2-36P-201ENST00000410361 191 ntBASIC3.5□□□□□ -1.85
CDH12P55289 RNU4-65P-201ENST00000410473 140 ntBASIC3.5□□□□□ -1.85
CDH12P55289 RNA5SP311-201ENST00000411290 116 ntBASIC3.5□□□□□ -1.85
CDH12P55289 USP9YP6-201ENST00000413550 854 ntBASIC3.5□□□□□ -1.85
CDH12P55289 UBE2FP1-201ENST00000416536 447 ntBASIC3.5□□□□□ -1.85
CDH12P55289 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDH12P55289 MTCO1P20-201ENST00000425366 358 ntBASIC3.5□□□□□ -1.85
CDH12P55289 AC090774.1-201ENST00000435925 246 ntBASIC3.5□□□□□ -1.85
CDH12P55289 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH12P55289 HMGN2P21-201ENST00000447764 270 ntBASIC3.5□□□□□ -1.85
CDH12P55289 AL359073.1-201ENST00000448036 403 ntBASIC3.5□□□□□ -1.85
CDH12P55289 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.5□□□□□ -1.85
CDH12P55289 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH12P55289 RNU6-420P-201ENST00000458780 107 ntBASIC3.5□□□□□ -1.85
CDH12P55289 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CDH12P55289 AC069439.1-201ENST00000494739 167 ntBASIC3.5□□□□□ -1.85
CDH12P55289 NIPA2P2-201ENST00000496376 1083 ntBASIC3.5□□□□□ -1.85
CDH12P55289 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CDH12P55289 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.5□□□□□ -1.85
CDH12P55289 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.5□□□□□ -1.85
CDH12P55289 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH12P55289 FTH1P9-201ENST00000513251 355 ntBASIC3.5□□□□□ -1.85
CDH12P55289 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH12P55289 AC026801.2-201ENST00000515352 425 ntBASIC3.5□□□□□ -1.85
CDH12P55289 RNA5SP315-201ENST00000516340 116 ntBASIC3.5□□□□□ -1.85
CDH12P55289 RNA5SP312-201ENST00000517068 116 ntBASIC3.5□□□□□ -1.85
CDH12P55289 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH12P55289 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH12P55289 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.5□□□□□ -1.85
CDH12P55289 AC109635.3-201ENST00000529536 185 ntBASIC3.5□□□□□ -1.85
CDH12P55289 AC104383.1-201ENST00000530297 370 ntBASIC3.5□□□□□ -1.85
CDH12P55289 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH12P55289 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH12P55289 AC123904.3-201ENST00000547218 814 ntBASIC3.5□□□□□ -1.85
CDH12P55289 AL512310.1-201ENST00000548639 172 ntBASIC3.5□□□□□ -1.85
CDH12P55289 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH12P55289 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH12P55289 AL359212.1-201ENST00000556608 614 ntBASIC3.5□□□□□ -1.85
CDH12P55289 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms