Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.19□□□□□ -1.9
LIMK2P53671 NPM1P11-201ENST00000417106 855 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 MTCYBP38-201ENST00000417160 1123 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.19□□□□□ -1.9
LIMK2P53671 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 AL353678.1-201ENST00000422735 741 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.19□□□□□ -1.9
LIMK2P53671 AC244035.1-201ENST00000430042 390 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.19□□□□□ -1.9
LIMK2P53671 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.19□□□□□ -1.9
LIMK2P53671 AL671855.1-201ENST00000446875 1203 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.19□□□□□ -1.9
LIMK2P53671 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.19□□□□□ -1.9
LIMK2P53671 SETP11-201ENST00000473027 690 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.19□□□□□ -1.9
LIMK2P53671 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.19□□□□□ -1.9
LIMK2P53671 KLHL2P1-201ENST00000508691 521 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.19□□□□□ -1.9
LIMK2P53671 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.19□□□□□ -1.9
LIMK2P53671 RPL12P22-201ENST00000519073 490 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.19□□□□□ -1.9
LIMK2P53671 CR383656.7-201ENST00000548164 174 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 HIGD1AP1-201ENST00000550979 275 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.19□□□□□ -1.9
LIMK2P53671 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.19□□□□□ -1.9
LIMK2P53671 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.19□□□□□ -1.9
LIMK2P53671 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.19□□□□□ -1.9
LIMK2P53671 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.19□□□□□ -1.9
LIMK2P53671 MIR2682-201ENST00000580305 110 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.19□□□□□ -1.9
LIMK2P53671 AP001029.3-201ENST00000588063 596 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 WISP1-OT1-201ENST00000602893 642 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 AC004853.1-201ENST00000604902 698 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 AC112220.3-201ENST00000605502 502 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 AL390208.1-201ENST00000605885 644 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 uc_338.25-201ENST00000613756 156 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 AL355810.1-201ENST00000614629 552 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 AL445264.1-201ENST00000621719 171 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 CRYM-AS1-204ENST00000637983 556 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.19□□□□□ -1.9
LIMK2P53671 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
LIMK2P53671 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LIMK2P53671 AL136164.4-201ENST00000625013 2135 ntBASIC3.19□□□□□ -1.9
LIMK2P53671 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.19□□□□□ -1.9
LIMK2P53671 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.18□□□□□ -1.9
LIMK2P53671 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LIMK2P53671 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.18□□□□□ -1.9
LIMK2P53671 AL353743.1-202ENST00000431724 1695 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 RNU6-28P-201ENST00000362378 107 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 MIR591-201ENST00000385290 95 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 RPL21P3-201ENST00000395517 478 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 RNU2-47P-201ENST00000410649 186 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 RNU6-920P-201ENST00000410926 92 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 PIGPP2-201ENST00000411569 458 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 USP9YP33-201ENST00000412220 421 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 AC063979.1-201ENST00000415539 377 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.18□□□□□ -1.9
LIMK2P53671 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.18□□□□□ -1.9
LIMK2P53671 AC079780.1-201ENST00000428259 207 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.18□□□□□ -1.9
LIMK2P53671 USP9YP35-201ENST00000435696 412 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 RPS12P18-201ENST00000442381 270 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.18□□□□□ -1.9
LIMK2P53671 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.18□□□□□ -1.9
LIMK2P53671 AC146507.2-201ENST00000460608 476 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 RPL31P50-201ENST00000471002 296 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 AC109925.1-201ENST00000478069 331 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 FAM172BP-201ENST00000487497 1089 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 AC092185.1-201ENST00000491371 97 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.18□□□□□ -1.9
LIMK2P53671 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.18□□□□□ -1.9
LIMK2P53671 MLLT10P2-201ENST00000506434 249 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.18□□□□□ -1.9
LIMK2P53671 LTV1P1-201ENST00000510683 1237 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 AC105914.1-201ENST00000511798 226 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.18□□□□□ -1.9
LIMK2P53671 RNU6-678P-201ENST00000516832 109 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.18□□□□□ -1.9
LIMK2P53671 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LIMK2P53671 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LIMK2P53671 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.18□□□□□ -1.9
LIMK2P53671 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.18□□□□□ -1.9
LIMK2P53671 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.18□□□□□ -1.9
LIMK2P53671 AC090615.1-201ENST00000577519 154 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.18□□□□□ -1.9
LIMK2P53671 AL031176.1-201ENST00000604554 466 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 AC013562.2-201ENST00000611632 603 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 AC135507.2-201ENST00000612443 309 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 PCMTD1P7-201ENST00000634506 357 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
LIMK2P53671 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LIMK2P53671 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.18□□□□□ -1.9
LIMK2P53671 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
LIMK2P53671 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LIMK2P53671 AL022578.1-201ENST00000439330 1433 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 AC011477.1-204ENST00000623416 1325 ntBASIC3.18□□□□□ -1.9
LIMK2P53671 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.18□□□□□ -1.9
LIMK2P53671 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.17□□□□□ -1.9
LIMK2P53671 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.17□□□□□ -1.9
LIMK2P53671 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms