Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.28□□□□□ -1.88
PDX1P52945 AC123904.2-201ENST00000548059 300 ntBASIC3.28□□□□□ -1.88
PDX1P52945 AC125611.2-201ENST00000551907 647 ntBASIC3.28□□□□□ -1.88
PDX1P52945 OR4T1P-201ENST00000554933 911 ntBASIC3.28□□□□□ -1.88
PDX1P52945 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.28□□□□□ -1.88
PDX1P52945 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.28□□□□□ -1.88
PDX1P52945 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.28□□□□□ -1.88
PDX1P52945 CKS1BP3-201ENST00000600888 237 ntBASIC3.28□□□□□ -1.88
PDX1P52945 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.28□□□□□ -1.88
PDX1P52945 AC092140.2-201ENST00000618027 521 ntBASIC3.28□□□□□ -1.88
PDX1P52945 AC022149.2-201ENST00000621061 203 ntBASIC3.28□□□□□ -1.88
PDX1P52945 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PDX1P52945 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDX1P52945 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PDX1P52945 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PDX1P52945 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
PDX1P52945 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDX1P52945 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.28□□□□□ -1.89
PDX1P52945 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.28□□□□□ -1.89
PDX1P52945 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
PDX1P52945 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDX1P52945 RNU6-1181P-201ENST00000384191 106 ntBASIC3.27□□□□□ -1.89
PDX1P52945 Y_RNA.553-201ENST00000384670 102 ntBASIC3.27□□□□□ -1.89
PDX1P52945 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.27□□□□□ -1.89
PDX1P52945 Y_RNA.608-201ENST00000410647 95 ntBASIC3.27□□□□□ -1.89
PDX1P52945 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.27□□□□□ -1.89
PDX1P52945 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.27□□□□□ -1.89
PDX1P52945 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.27□□□□□ -1.89
PDX1P52945 DUTP6-201ENST00000425573 462 ntBASIC3.27□□□□□ -1.89
PDX1P52945 MTCO1P39-201ENST00000426148 480 ntBASIC3.27□□□□□ -1.89
PDX1P52945 RPL21P66-201ENST00000426566 466 ntBASIC3.27□□□□□ -1.89
PDX1P52945 AL158071.1-201ENST00000430315 461 ntBASIC3.27□□□□□ -1.89
PDX1P52945 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.27□□□□□ -1.89
PDX1P52945 MTCO1P19-201ENST00000443487 500 ntBASIC3.27□□□□□ -1.89
PDX1P52945 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.27□□□□□ -1.89
PDX1P52945 USP9YP29-201ENST00000445112 563 ntBASIC3.27□□□□□ -1.89
PDX1P52945 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.27□□□□□ -1.89
PDX1P52945 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.27□□□□□ -1.89
PDX1P52945 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PDX1P52945 AC234775.1-201ENST00000454247 670 ntBASIC3.27□□□□□ -1.89
PDX1P52945 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.27□□□□□ -1.89
PDX1P52945 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.27□□□□□ -1.89
PDX1P52945 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.27□□□□□ -1.89
PDX1P52945 AC055855.1-201ENST00000489563 579 ntBASIC3.27□□□□□ -1.89
PDX1P52945 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.27□□□□□ -1.89
PDX1P52945 KLHL2P1-201ENST00000508691 521 ntBASIC3.27□□□□□ -1.89
PDX1P52945 PCBP2P3-201ENST00000509726 843 ntBASIC3.27□□□□□ -1.89
PDX1P52945 FCF1P8-201ENST00000510322 597 ntBASIC3.27□□□□□ -1.89
PDX1P52945 AC026801.2-201ENST00000515352 425 ntBASIC3.27□□□□□ -1.89
PDX1P52945 RN7SKP289-201ENST00000517244 295 ntBASIC3.27□□□□□ -1.89
PDX1P52945 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.27□□□□□ -1.89
PDX1P52945 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.27□□□□□ -1.89
PDX1P52945 AP003122.4-201ENST00000530980 758 ntBASIC3.27□□□□□ -1.89
PDX1P52945 SNRPGP16-201ENST00000533275 226 ntBASIC3.27□□□□□ -1.89
PDX1P52945 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PDX1P52945 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.27□□□□□ -1.89
PDX1P52945 AC005476.1-201ENST00000554427 397 ntBASIC3.27□□□□□ -1.89
PDX1P52945 EIF4BP1-201ENST00000554881 351 ntBASIC3.27□□□□□ -1.89
PDX1P52945 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.27□□□□□ -1.89
PDX1P52945 FAM60BP-201ENST00000578364 658 ntBASIC3.27□□□□□ -1.89
PDX1P52945 AC022146.1-201ENST00000595307 847 ntBASIC3.27□□□□□ -1.89
PDX1P52945 AC112191.3-201ENST00000604371 277 ntBASIC3.27□□□□□ -1.89
PDX1P52945 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.27□□□□□ -1.89
PDX1P52945 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.27□□□□□ -1.89
PDX1P52945 AC138749.5-201ENST00000611461 208 ntBASIC3.27□□□□□ -1.89
PDX1P52945 AL450472.3-201ENST00000615578 367 ntBASIC3.27□□□□□ -1.89
PDX1P52945 AC116165.2-201ENST00000616705 206 ntBASIC3.27□□□□□ -1.89
PDX1P52945 AL603839.4-201ENST00000624658 1005 ntBASIC3.27□□□□□ -1.89
PDX1P52945 AC090582.1-201ENST00000636321 199 ntBASIC3.27□□□□□ -1.89
PDX1P52945 MTCO1P9-201ENST00000505577 1534 ntBASIC3.27□□□□□ -1.89
PDX1P52945 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.27□□□□□ -1.89
PDX1P52945 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDX1P52945 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PDX1P52945 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PDX1P52945 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PDX1P52945 Z83843.1-201ENST00000604070 3685 ntBASIC3.26□□□□□ -1.89
PDX1P52945 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.26□□□□□ -1.89
PDX1P52945 RNA5SP197-201ENST00000363357 119 ntBASIC3.26□□□□□ -1.89
PDX1P52945 Y_RNA.318-201ENST00000365131 97 ntBASIC3.26□□□□□ -1.89
PDX1P52945 MIR19A-201ENST00000384878 82 ntBASIC3.26□□□□□ -1.89
PDX1P52945 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PDX1P52945 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.26□□□□□ -1.89
PDX1P52945 CCDC58P2-201ENST00000417131 366 ntBASIC3.26□□□□□ -1.89
PDX1P52945 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.26□□□□□ -1.89
PDX1P52945 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.26□□□□□ -1.89
PDX1P52945 UBE2V1P13-201ENST00000436983 439 ntBASIC3.26□□□□□ -1.89
PDX1P52945 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.26□□□□□ -1.89
PDX1P52945 AL031667.1-201ENST00000440222 725 ntBASIC3.26□□□□□ -1.89
PDX1P52945 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PDX1P52945 ST13P20-201ENST00000447996 1065 ntBASIC3.26□□□□□ -1.89
PDX1P52945 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.26□□□□□ -1.89
PDX1P52945 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.26□□□□□ -1.89
PDX1P52945 snoU13.4-201ENST00000458916 104 ntBASIC3.26□□□□□ -1.89
PDX1P52945 MTND4LP3-201ENST00000468320 276 ntBASIC3.26□□□□□ -1.89
PDX1P52945 AC093278.1-201ENST00000494700 600 ntBASIC3.26□□□□□ -1.89
PDX1P52945 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.26□□□□□ -1.89
PDX1P52945 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.26□□□□□ -1.89
PDX1P52945 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.26□□□□□ -1.89
PDX1P52945 AC022616.6-201ENST00000520479 119 ntBASIC3.26□□□□□ -1.89
PDX1P52945 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms