Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC105252.1-201ENST00000503089 286 ntBASIC1.81□□□□□ -2.12
SRP9P49458 AC008885.2-201ENST00000509506 930 ntBASIC1.81□□□□□ -2.12
SRP9P49458 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.81□□□□□ -2.12
SRP9P49458 CASP1P1-201ENST00000526345 212 ntBASIC1.81□□□□□ -2.12
SRP9P49458 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.81□□□□□ -2.12
SRP9P49458 AC074029.2-201ENST00000551045 634 ntBASIC1.81□□□□□ -2.12
SRP9P49458 OR11H5P-201ENST00000554039 926 ntBASIC1.81□□□□□ -2.12
SRP9P49458 AC012254.4-201ENST00000588843 273 ntBASIC1.81□□□□□ -2.12
SRP9P49458 AL355877.2-201ENST00000603670 358 ntBASIC1.81□□□□□ -2.12
SRP9P49458 AC002487.1-201ENST00000604565 994 ntBASIC1.81□□□□□ -2.12
SRP9P49458 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.81□□□□□ -2.12
SRP9P49458 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.81□□□□□ -2.12
SRP9P49458 AC024023.1-201ENST00000624530 922 ntBASIC1.81□□□□□ -2.12
SRP9P49458 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.81□□□□□ -2.12
SRP9P49458 U6.107-201ENST00000637108 79 ntBASIC1.81□□□□□ -2.12
SRP9P49458 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.81□□□□□ -2.12
SRP9P49458 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.81□□□□□ -2.12
SRP9P49458 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
SRP9P49458 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.8□□□□□ -2.12
SRP9P49458 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.8□□□□□ -2.12
SRP9P49458 RNU6-173P-201ENST00000364215 104 ntBASIC1.8□□□□□ -2.12
SRP9P49458 SNORA70B-201ENST00000384210 135 ntBASIC1.8□□□□□ -2.12
SRP9P49458 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
SRP9P49458 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.8□□□□□ -2.12
SRP9P49458 AC234781.2-201ENST00000426370 994 ntBASIC1.8□□□□□ -2.12
SRP9P49458 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.8□□□□□ -2.12
SRP9P49458 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.8□□□□□ -2.12
SRP9P49458 RPL35AP22-201ENST00000436855 335 ntBASIC1.8□□□□□ -2.12
SRP9P49458 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.8□□□□□ -2.12
SRP9P49458 FAM103A2P-201ENST00000444122 354 ntBASIC1.8□□□□□ -2.12
SRP9P49458 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.8□□□□□ -2.12
SRP9P49458 MTCO3P11-201ENST00000455103 774 ntBASIC1.8□□□□□ -2.12
SRP9P49458 RN7SL274P-201ENST00000492268 272 ntBASIC1.8□□□□□ -2.12
SRP9P49458 RPL9P6-201ENST00000492764 598 ntBASIC1.8□□□□□ -2.12
SRP9P49458 AP000926.3-201ENST00000497201 299 ntBASIC1.8□□□□□ -2.12
SRP9P49458 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.8□□□□□ -2.12
SRP9P49458 AC104057.1-201ENST00000515547 497 ntBASIC1.8□□□□□ -2.12
SRP9P49458 RN7SKP31-201ENST00000516354 278 ntBASIC1.8□□□□□ -2.12
SRP9P49458 AC008676.3-201ENST00000521237 435 ntBASIC1.8□□□□□ -2.12
SRP9P49458 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SRP9P49458 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.8□□□□□ -2.12
SRP9P49458 HMGB1P14-201ENST00000557424 591 ntBASIC1.8□□□□□ -2.12
SRP9P49458 AC022662.1-201ENST00000580252 331 ntBASIC1.8□□□□□ -2.12
SRP9P49458 AC040174.2-201ENST00000602701 465 ntBASIC1.8□□□□□ -2.12
SRP9P49458 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.8□□□□□ -2.12
SRP9P49458 AC135507.1-201ENST00000607214 561 ntBASIC1.8□□□□□ -2.12
SRP9P49458 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.8□□□□□ -2.12
SRP9P49458 AC120053.1-201ENST00000607706 736 ntBASIC1.8□□□□□ -2.12
SRP9P49458 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.8□□□□□ -2.12
SRP9P49458 AL627230.6-201ENST00000611129 280 ntBASIC1.8□□□□□ -2.12
SRP9P49458 MIR219B-201ENST00000637023 88 ntBASIC1.8□□□□□ -2.12
SRP9P49458 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.8□□□□□ -2.12
SRP9P49458 RNA5SP126-201ENST00000365092 109 ntBASIC1.79□□□□□ -2.12
SRP9P49458 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
SRP9P49458 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.79□□□□□ -2.12
SRP9P49458 SUMO2P12-201ENST00000405924 140 ntBASIC1.79□□□□□ -2.12
SRP9P49458 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.79□□□□□ -2.12
SRP9P49458 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.79□□□□□ -2.12
SRP9P49458 EIF4EP4-201ENST00000424916 578 ntBASIC1.79□□□□□ -2.12
SRP9P49458 FGF7P5-201ENST00000441829 291 ntBASIC1.79□□□□□ -2.12
SRP9P49458 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.79□□□□□ -2.12
SRP9P49458 HMGN1P5-201ENST00000448591 263 ntBASIC1.79□□□□□ -2.12
SRP9P49458 AC072039.1-201ENST00000477611 581 ntBASIC1.79□□□□□ -2.12
SRP9P49458 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.79□□□□□ -2.12
SRP9P49458 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.79□□□□□ -2.12
SRP9P49458 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.79□□□□□ -2.12
SRP9P49458 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.79□□□□□ -2.12
SRP9P49458 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.79□□□□□ -2.12
SRP9P49458 AC135628.1-201ENST00000568867 534 ntBASIC1.79□□□□□ -2.12
SRP9P49458 MIR4287-201ENST00000579398 78 ntBASIC1.79□□□□□ -2.12
SRP9P49458 AC007229.1-201ENST00000590455 412 ntBASIC1.79□□□□□ -2.12
SRP9P49458 AC012669.1-201ENST00000603209 283 ntBASIC1.79□□□□□ -2.12
SRP9P49458 AL136981.2-201ENST00000617319 734 ntBASIC1.79□□□□□ -2.12
SRP9P49458 AC010378.1-201ENST00000619270 362 ntBASIC1.79□□□□□ -2.12
SRP9P49458 DUXAP9-208ENST00000622815 614 ntBASIC1.79□□□□□ -2.12
SRP9P49458 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.79□□□□□ -2.12
SRP9P49458 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.79□□□□□ -2.12
SRP9P49458 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SRP9P49458 AC092881.1-201ENST00000638218 2733 ntBASIC1.78□□□□□ -2.12
SRP9P49458 CCT4P2-201ENST00000233836 1548 ntBASIC1.78□□□□□ -2.12
SRP9P49458 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SRP9P49458 AC011477.1-204ENST00000623416 1325 ntBASIC1.78□□□□□ -2.12
SRP9P49458 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SRP9P49458 RNU6-253P-201ENST00000384730 105 ntBASIC1.78□□□□□ -2.12
SRP9P49458 RN7SKP32-201ENST00000410167 303 ntBASIC1.78□□□□□ -2.12
SRP9P49458 RPS3AP9-201ENST00000417027 792 ntBASIC1.78□□□□□ -2.12
SRP9P49458 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.78□□□□□ -2.12
SRP9P49458 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.78□□□□□ -2.12
SRP9P49458 PTP4A1P7-201ENST00000423476 514 ntBASIC1.78□□□□□ -2.12
SRP9P49458 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.78□□□□□ -2.12
SRP9P49458 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.78□□□□□ -2.12
SRP9P49458 AC009237.8-201ENST00000445492 379 ntBASIC1.78□□□□□ -2.12
SRP9P49458 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.78□□□□□ -2.12
SRP9P49458 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.78□□□□□ -2.12
SRP9P49458 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.78□□□□□ -2.12
SRP9P49458 HSPE1P18-201ENST00000517602 280 ntBASIC1.78□□□□□ -2.12
SRP9P49458 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.78□□□□□ -2.12
SRP9P49458 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.78□□□□□ -2.12
SRP9P49458 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC1.78□□□□□ -2.12
SRP9P49458 MIR4648-201ENST00000580107 72 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms