Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.41□□□□□ -2.18
CENPFP49454 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.41□□□□□ -2.18
CENPFP49454 RNA5SP354-201ENST00000391247 136 ntBASIC1.41□□□□□ -2.18
CENPFP49454 RNA5SP489-201ENST00000410986 109 ntBASIC1.41□□□□□ -2.18
CENPFP49454 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.41□□□□□ -2.18
CENPFP49454 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.41□□□□□ -2.18
CENPFP49454 Y_RNA.675-201ENST00000516389 149 ntBASIC1.41□□□□□ -2.18
CENPFP49454 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.41□□□□□ -2.18
CENPFP49454 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CENPFP49454 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CENPFP49454 RNU1-148P-201ENST00000384472 162 ntBASIC1.4□□□□□ -2.18
CENPFP49454 RPS6P12-201ENST00000432491 726 ntBASIC1.4□□□□□ -2.18
CENPFP49454 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.18
CENPFP49454 CBX3P2-202ENST00000583365 535 ntBASIC1.4□□□□□ -2.18
CENPFP49454 AL159169.2-201ENST00000610061 1269 ntBASIC1.4□□□□□ -2.18
CENPFP49454 AL358176.2-201ENST00000425769 204 ntBASIC1.4□□□□□ -2.19
CENPFP49454 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.4□□□□□ -2.19
CENPFP49454 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.4□□□□□ -2.19
CENPFP49454 AC006499.2-201ENST00000513470 337 ntBASIC1.4□□□□□ -2.19
CENPFP49454 AC090821.2-201ENST00000523552 176 ntBASIC1.4□□□□□ -2.19
CENPFP49454 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.4□□□□□ -2.19
CENPFP49454 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.39□□□□□ -2.19
CENPFP49454 RNA5SP330-201ENST00000517096 96 ntBASIC1.39□□□□□ -2.19
CENPFP49454 DNAJC8P1-201ENST00000554535 372 ntBASIC1.39□□□□□ -2.19
CENPFP49454 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CENPFP49454 AL109933.3-201ENST00000619095 188 ntBASIC1.39□□□□□ -2.19
CENPFP49454 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CENPFP49454 AC007342.9-201ENST00000623877 1385 ntBASIC1.39□□□□□ -2.19
CENPFP49454 MIR758-201ENST00000390227 88 ntBASIC1.39□□□□□ -2.19
CENPFP49454 AC008427.1-201ENST00000503102 655 ntBASIC1.39□□□□□ -2.19
CENPFP49454 AC116158.1-201ENST00000560231 2129 ntBASIC1.39□□□□□ -2.19
CENPFP49454 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CENPFP49454 AL020996.3-201ENST00000606617 222 ntBASIC1.38□□□□□ -2.19
CENPFP49454 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.38□□□□□ -2.19
CENPFP49454 RPL31P35-201ENST00000431058 377 ntBASIC1.38□□□□□ -2.19
CENPFP49454 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.38□□□□□ -2.19
CENPFP49454 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.38□□□□□ -2.19
CENPFP49454 AC118942.1-201ENST00000529674 1035 ntBASIC1.38□□□□□ -2.19
CENPFP49454 MIR3973-201ENST00000579824 107 ntBASIC1.38□□□□□ -2.19
CENPFP49454 MAGOH2P-202ENST00000584384 429 ntBASIC1.38□□□□□ -2.19
CENPFP49454 GLUD1P4-201ENST00000590914 418 ntBASIC1.38□□□□□ -2.19
CENPFP49454 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.38□□□□□ -2.19
CENPFP49454 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
CENPFP49454 HSPE1P11-201ENST00000339579 310 ntBASIC1.38□□□□□ -2.19
CENPFP49454 AC096571.1-202ENST00000506634 735 ntBASIC1.38□□□□□ -2.19
CENPFP49454 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CENPFP49454 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
CENPFP49454 AC018630.2-202ENST00000422992 927 ntBASIC1.37□□□□□ -2.19
CENPFP49454 HMGN2P38-201ENST00000423806 265 ntBASIC1.37□□□□□ -2.19
CENPFP49454 AC023790.1-201ENST00000482174 347 ntBASIC1.37□□□□□ -2.19
CENPFP49454 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.37□□□□□ -2.19
CENPFP49454 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.37□□□□□ -2.19
CENPFP49454 AC121761.2-201ENST00000617300 689 ntBASIC1.37□□□□□ -2.19
CENPFP49454 AP000648.3-201ENST00000623539 4507 ntBASIC1.37□□□□□ -2.19
CENPFP49454 RNF6P1-201ENST00000444889 1784 ntBASIC1.37□□□□□ -2.19
CENPFP49454 uc_338.20-201ENST00000621563 178 ntBASIC1.37□□□□□ -2.19
CENPFP49454 AP000676.4-201ENST00000624659 623 ntBASIC1.37□□□□□ -2.19
CENPFP49454 Y_RNA.390-201ENST00000383932 102 ntBASIC1.36□□□□□ -2.19
CENPFP49454 Z85994.2-201ENST00000434327 452 ntBASIC1.36□□□□□ -2.19
CENPFP49454 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.36□□□□□ -2.19
CENPFP49454 AC005912.1-201ENST00000495392 255 ntBASIC1.36□□□□□ -2.19
CENPFP49454 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.36□□□□□ -2.19
CENPFP49454 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
CENPFP49454 SNORA18.2-201ENST00000383865 132 ntBASIC1.36□□□□□ -2.19
CENPFP49454 AC017078.1-201ENST00000416146 368 ntBASIC1.36□□□□□ -2.19
CENPFP49454 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.36□□□□□ -2.19
CENPFP49454 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.36□□□□□ -2.19
CENPFP49454 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.36□□□□□ -2.19
CENPFP49454 MTCYBP35-201ENST00000503630 1137 ntBASIC1.36□□□□□ -2.19
CENPFP49454 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.36□□□□□ -2.19
CENPFP49454 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.36□□□□□ -2.19
CENPFP49454 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.36□□□□□ -2.19
CENPFP49454 AP002907.1-201ENST00000606361 1430 ntBASIC1.36□□□□□ -2.19
CENPFP49454 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.36□□□□□ -2.19
CENPFP49454 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
CENPFP49454 HSPE1P4-201ENST00000550617 308 ntBASIC1.36□□□□□ -2.19
CENPFP49454 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.36□□□□□ -2.19
CENPFP49454 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CENPFP49454 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CENPFP49454 RN7SKP200-201ENST00000410564 320 ntBASIC1.35□□□□□ -2.19
CENPFP49454 MTND4LP5-201ENST00000605152 292 ntBASIC1.35□□□□□ -2.19
CENPFP49454 AC006338.1-201ENST00000618453 749 ntBASIC1.35□□□□□ -2.19
CENPFP49454 AC091152.2-201ENST00000591628 2569 ntBASIC1.35□□□□□ -2.19
CENPFP49454 Y_RNA.85-201ENST00000363014 111 ntBASIC1.35□□□□□ -2.19
CENPFP49454 RNA5SP127-201ENST00000411051 133 ntBASIC1.35□□□□□ -2.19
CENPFP49454 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.35□□□□□ -2.19
CENPFP49454 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.35□□□□□ -2.19
CENPFP49454 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.35□□□□□ -2.19
CENPFP49454 AL445493.3-201ENST00000619568 477 ntBASIC1.35□□□□□ -2.19
CENPFP49454 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
CENPFP49454 AC135776.4-201ENST00000624300 1904 ntBASIC1.35□□□□□ -2.19
CENPFP49454 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.34□□□□□ -2.19
CENPFP49454 AL445183.3-201ENST00000414168 502 ntBASIC1.34□□□□□ -2.19
CENPFP49454 SNORA31.26-201ENST00000517250 137 ntBASIC1.34□□□□□ -2.19
CENPFP49454 AP004242.1-201ENST00000533701 349 ntBASIC1.34□□□□□ -2.19
CENPFP49454 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CENPFP49454 Y_RNA.60-201ENST00000362831 98 ntBASIC1.34□□□□□ -2.2
CENPFP49454 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.34□□□□□ -2.2
CENPFP49454 AC073264.1-201ENST00000411508 416 ntBASIC1.34□□□□□ -2.2
CENPFP49454 AC107032.1-201ENST00000485945 480 ntBASIC1.34□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms