Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.32□□□□□ -1.88
LHX1P48742 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.32□□□□□ -1.88
LHX1P48742 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.32□□□□□ -1.88
LHX1P48742 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.32□□□□□ -1.88
LHX1P48742 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.32□□□□□ -1.88
LHX1P48742 AC011260.1-201ENST00000578420 472 ntBASIC3.32□□□□□ -1.88
LHX1P48742 BDH2P1-201ENST00000602288 736 ntBASIC3.32□□□□□ -1.88
LHX1P48742 WISP1-OT1-201ENST00000602893 642 ntBASIC3.32□□□□□ -1.88
LHX1P48742 AC009268.2-201ENST00000621925 457 ntBASIC3.32□□□□□ -1.88
LHX1P48742 AC007494.3-201ENST00000624660 743 ntBASIC3.32□□□□□ -1.88
LHX1P48742 AC091965.5-201ENST00000624785 342 ntBASIC3.32□□□□□ -1.88
LHX1P48742 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.32□□□□□ -1.88
LHX1P48742 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.32□□□□□ -1.88
LHX1P48742 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LHX1P48742 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
LHX1P48742 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.32□□□□□ -1.88
LHX1P48742 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.32□□□□□ -1.88
LHX1P48742 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.32□□□□□ -1.88
LHX1P48742 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.32□□□□□ -1.88
LHX1P48742 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LHX1P48742 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.31□□□□□ -1.88
LHX1P48742 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.31□□□□□ -1.88
LHX1P48742 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.31□□□□□ -1.88
LHX1P48742 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LHX1P48742 AC092125.1-201ENST00000562568 1995 ntBASIC3.31□□□□□ -1.88
LHX1P48742 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LHX1P48742 AL353743.1-202ENST00000431724 1695 ntBASIC3.31□□□□□ -1.88
LHX1P48742 CCT4P2-201ENST00000233836 1548 ntBASIC3.31□□□□□ -1.88
LHX1P48742 AL445523.1-201ENST00000451184 1362 ntBASIC3.31□□□□□ -1.88
LHX1P48742 Y_RNA.97-201ENST00000363094 102 ntBASIC3.31□□□□□ -1.88
LHX1P48742 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.31□□□□□ -1.88
LHX1P48742 RNU6-637P-201ENST00000384050 107 ntBASIC3.31□□□□□ -1.88
LHX1P48742 AL138885.1-201ENST00000405921 675 ntBASIC3.31□□□□□ -1.88
LHX1P48742 TPMTP3-201ENST00000411928 735 ntBASIC3.31□□□□□ -1.88
LHX1P48742 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.31□□□□□ -1.88
LHX1P48742 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.31□□□□□ -1.88
LHX1P48742 MTATP6P4-201ENST00000427725 675 ntBASIC3.31□□□□□ -1.88
LHX1P48742 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.31□□□□□ -1.88
LHX1P48742 AL365184.2-201ENST00000431139 435 ntBASIC3.31□□□□□ -1.88
LHX1P48742 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.31□□□□□ -1.88
LHX1P48742 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.31□□□□□ -1.88
LHX1P48742 RPL37P21-201ENST00000435890 276 ntBASIC3.31□□□□□ -1.88
LHX1P48742 LARP1BP3-201ENST00000437229 869 ntBASIC3.31□□□□□ -1.88
LHX1P48742 AL512286.1-201ENST00000439244 400 ntBASIC3.31□□□□□ -1.88
LHX1P48742 RABEPKP1-201ENST00000440529 1026 ntBASIC3.31□□□□□ -1.88
LHX1P48742 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.31□□□□□ -1.88
LHX1P48742 AC016696.1-201ENST00000446949 318 ntBASIC3.31□□□□□ -1.88
LHX1P48742 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.31□□□□□ -1.88
LHX1P48742 RPS29P2-201ENST00000479278 136 ntBASIC3.31□□□□□ -1.88
LHX1P48742 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.31□□□□□ -1.88
LHX1P48742 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.31□□□□□ -1.88
LHX1P48742 CBX3P3-201ENST00000508108 532 ntBASIC3.31□□□□□ -1.88
LHX1P48742 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.31□□□□□ -1.88
LHX1P48742 AC119751.5-201ENST00000514077 770 ntBASIC3.31□□□□□ -1.88
LHX1P48742 AC116347.2-201ENST00000514912 523 ntBASIC3.31□□□□□ -1.88
LHX1P48742 RNA5SP341-201ENST00000516261 117 ntBASIC3.31□□□□□ -1.88
LHX1P48742 MTCO1P47-201ENST00000523889 1271 ntBASIC3.31□□□□□ -1.88
LHX1P48742 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.31□□□□□ -1.88
LHX1P48742 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.31□□□□□ -1.88
LHX1P48742 AC008088.1-201ENST00000580993 280 ntBASIC3.31□□□□□ -1.88
LHX1P48742 UBE2L4-201ENST00000587688 464 ntBASIC3.31□□□□□ -1.88
LHX1P48742 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.31□□□□□ -1.88
LHX1P48742 AC005000.2-201ENST00000605468 310 ntBASIC3.31□□□□□ -1.88
LHX1P48742 AL162274.2-201ENST00000614406 332 ntBASIC3.31□□□□□ -1.88
LHX1P48742 AL158801.5-201ENST00000623123 465 ntBASIC3.31□□□□□ -1.88
LHX1P48742 AC091931.1-201ENST00000623488 728 ntBASIC3.31□□□□□ -1.88
LHX1P48742 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.31□□□□□ -1.88
LHX1P48742 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LHX1P48742 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.3□□□□□ -1.88
LHX1P48742 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LHX1P48742 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LHX1P48742 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
LHX1P48742 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LHX1P48742 AC012321.1-201ENST00000561622 1588 ntBASIC3.3□□□□□ -1.88
LHX1P48742 AC005832.2-201ENST00000538921 1430 ntBASIC3.3□□□□□ -1.88
LHX1P48742 RNU5F-7P-201ENST00000363696 115 ntBASIC3.3□□□□□ -1.88
LHX1P48742 SNORD116-8-201ENST00000384365 95 ntBASIC3.3□□□□□ -1.88
LHX1P48742 SNORA48.2-201ENST00000390926 124 ntBASIC3.3□□□□□ -1.88
LHX1P48742 RN7SKP220-201ENST00000410611 288 ntBASIC3.3□□□□□ -1.88
LHX1P48742 RNU6-516P-201ENST00000411381 104 ntBASIC3.3□□□□□ -1.88
LHX1P48742 MTND1P21-201ENST00000412991 285 ntBASIC3.3□□□□□ -1.88
LHX1P48742 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.3□□□□□ -1.88
LHX1P48742 RPL32P35-201ENST00000415214 394 ntBASIC3.3□□□□□ -1.88
LHX1P48742 Z99497.1-201ENST00000421282 135 ntBASIC3.3□□□□□ -1.88
LHX1P48742 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.3□□□□□ -1.88
LHX1P48742 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.3□□□□□ -1.88
LHX1P48742 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.3□□□□□ -1.88
LHX1P48742 MED14P1-201ENST00000430517 648 ntBASIC3.3□□□□□ -1.88
LHX1P48742 AC090774.1-201ENST00000435925 246 ntBASIC3.3□□□□□ -1.88
LHX1P48742 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.3□□□□□ -1.88
LHX1P48742 MTND1P30-201ENST00000441241 901 ntBASIC3.3□□□□□ -1.88
LHX1P48742 TXNP1-201ENST00000441872 371 ntBASIC3.3□□□□□ -1.88
LHX1P48742 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LHX1P48742 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.3□□□□□ -1.88
LHX1P48742 S100A11P2-201ENST00000467589 312 ntBASIC3.3□□□□□ -1.88
LHX1P48742 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.3□□□□□ -1.88
LHX1P48742 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.3□□□□□ -1.88
LHX1P48742 DSTNP2-201ENST00000504533 515 ntBASIC3.3□□□□□ -1.88
LHX1P48742 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.3□□□□□ -1.88
LHX1P48742 AC118465.1-201ENST00000513820 1271 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms