Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.57□□□□□ -2
RFX3P48380 AL449283.1-202ENST00000418249 604 ntBASIC2.57□□□□□ -2
RFX3P48380 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.57□□□□□ -2
RFX3P48380 AL139421.1-201ENST00000423010 169 ntBASIC2.57□□□□□ -2
RFX3P48380 NDUFB4P7-201ENST00000423198 363 ntBASIC2.57□□□□□ -2
RFX3P48380 AC087499.2-201ENST00000432861 149 ntBASIC2.57□□□□□ -2
RFX3P48380 AL714022.1-201ENST00000439897 151 ntBASIC2.57□□□□□ -2
RFX3P48380 MTCO1P53-201ENST00000441633 699 ntBASIC2.57□□□□□ -2
RFX3P48380 AC009237.8-201ENST00000445492 379 ntBASIC2.57□□□□□ -2
RFX3P48380 ARPC3P5-201ENST00000448802 534 ntBASIC2.57□□□□□ -2
RFX3P48380 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.57□□□□□ -2
RFX3P48380 SNORA59A-201ENST00000459326 152 ntBASIC2.57□□□□□ -2
RFX3P48380 AC116337.2-201ENST00000477662 156 ntBASIC2.57□□□□□ -2
RFX3P48380 AC103975.1-201ENST00000482506 483 ntBASIC2.57□□□□□ -2
RFX3P48380 RPS27P26-201ENST00000494583 239 ntBASIC2.57□□□□□ -2
RFX3P48380 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.57□□□□□ -2
RFX3P48380 MTCYBP17-201ENST00000503579 789 ntBASIC2.57□□□□□ -2
RFX3P48380 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.57□□□□□ -2
RFX3P48380 AC119751.5-201ENST00000514077 770 ntBASIC2.57□□□□□ -2
RFX3P48380 SNORA19.3-201ENST00000516165 130 ntBASIC2.57□□□□□ -2
RFX3P48380 RNU1-103P-201ENST00000516502 125 ntBASIC2.57□□□□□ -2
RFX3P48380 AC103783.1-201ENST00000520506 373 ntBASIC2.57□□□□□ -2
RFX3P48380 MTCO1P47-201ENST00000523889 1271 ntBASIC2.57□□□□□ -2
RFX3P48380 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.57□□□□□ -2
RFX3P48380 AL133271.1-201ENST00000538229 291 ntBASIC2.57□□□□□ -2
RFX3P48380 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.57□□□□□ -2
RFX3P48380 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RFX3P48380 AC068135.2-201ENST00000569293 1028 ntBASIC2.57□□□□□ -2
RFX3P48380 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.57□□□□□ -2
RFX3P48380 VN1R78P-201ENST00000597393 564 ntBASIC2.57□□□□□ -2
RFX3P48380 BNIP3P26-201ENST00000600827 554 ntBASIC2.57□□□□□ -2
RFX3P48380 AP001429.1-201ENST00000602568 530 ntBASIC2.57□□□□□ -2
RFX3P48380 RPL23AP88-201ENST00000605759 454 ntBASIC2.57□□□□□ -2
RFX3P48380 AL390208.1-201ENST00000605885 644 ntBASIC2.57□□□□□ -2
RFX3P48380 AC005014.3-201ENST00000605985 190 ntBASIC2.57□□□□□ -2
RFX3P48380 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.57□□□□□ -2
RFX3P48380 OR5H6-203ENST00000642105 978 ntBASIC2.57□□□□□ -2
RFX3P48380 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.57□□□□□ -2
RFX3P48380 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RFX3P48380 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.56□□□□□ -2
RFX3P48380 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.56□□□□□ -2
RFX3P48380 RNU6-560P-201ENST00000364007 108 ntBASIC2.56□□□□□ -2
RFX3P48380 AC068533.2-201ENST00000411872 306 ntBASIC2.56□□□□□ -2
RFX3P48380 AL513477.1-202ENST00000417061 214 ntBASIC2.56□□□□□ -2
RFX3P48380 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.56□□□□□ -2
RFX3P48380 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.56□□□□□ -2
RFX3P48380 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.56□□□□□ -2
RFX3P48380 AC129850.1-201ENST00000436203 508 ntBASIC2.56□□□□□ -2
RFX3P48380 AL513043.1-201ENST00000439124 535 ntBASIC2.56□□□□□ -2
RFX3P48380 AL831737.1-201ENST00000441288 271 ntBASIC2.56□□□□□ -2
RFX3P48380 AC025750.2-201ENST00000442609 450 ntBASIC2.56□□□□□ -2
RFX3P48380 AL135938.1-201ENST00000443141 297 ntBASIC2.56□□□□□ -2
RFX3P48380 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.56□□□□□ -2
RFX3P48380 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.56□□□□□ -2
RFX3P48380 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.56□□□□□ -2
RFX3P48380 RPL18AP17-201ENST00000455326 198 ntBASIC2.56□□□□□ -2
RFX3P48380 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.56□□□□□ -2
RFX3P48380 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.56□□□□□ -2
RFX3P48380 RNU6-420P-201ENST00000458780 107 ntBASIC2.56□□□□□ -2
RFX3P48380 AC008571.1-201ENST00000467232 300 ntBASIC2.56□□□□□ -2
RFX3P48380 AL049874.1-201ENST00000489560 388 ntBASIC2.56□□□□□ -2
RFX3P48380 AC098799.2-201ENST00000509466 868 ntBASIC2.56□□□□□ -2
RFX3P48380 SNORA9.3-201ENST00000516383 129 ntBASIC2.56□□□□□ -2
RFX3P48380 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.56□□□□□ -2
RFX3P48380 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.56□□□□□ -2
RFX3P48380 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.56□□□□□ -2
RFX3P48380 AL132657.2-201ENST00000564417 358 ntBASIC2.56□□□□□ -2
RFX3P48380 AC019159.1-201ENST00000605094 187 ntBASIC2.56□□□□□ -2
RFX3P48380 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.56□□□□□ -2
RFX3P48380 AC004067.1-201ENST00000608733 700 ntBASIC2.56□□□□□ -2
RFX3P48380 AL590099.1-201ENST00000615276 138 ntBASIC2.56□□□□□ -2
RFX3P48380 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.56□□□□□ -2
RFX3P48380 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.56□□□□□ -2
RFX3P48380 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.56□□□□□ -2
RFX3P48380 MTND4P9-201ENST00000507819 1346 ntBASIC2.56□□□□□ -2
RFX3P48380 AC138915.1-201ENST00000565427 1685 ntBASIC2.56□□□□□ -2
RFX3P48380 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
RFX3P48380 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.56□□□□□ -2
RFX3P48380 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
RFX3P48380 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.56□□□□□ -2
RFX3P48380 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.55□□□□□ -2
RFX3P48380 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.55□□□□□ -2
RFX3P48380 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.55□□□□□ -2
RFX3P48380 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.55□□□□□ -2
RFX3P48380 RNU1-109P-201ENST00000383960 147 ntBASIC2.55□□□□□ -2
RFX3P48380 RNU6-413P-201ENST00000384115 107 ntBASIC2.55□□□□□ -2
RFX3P48380 SNORA36C-201ENST00000384289 132 ntBASIC2.55□□□□□ -2
RFX3P48380 SNORD116-12-201ENST00000384468 92 ntBASIC2.55□□□□□ -2
RFX3P48380 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.55□□□□□ -2
RFX3P48380 BX682237.1-201ENST00000415016 335 ntBASIC2.55□□□□□ -2
RFX3P48380 CCDC58P2-201ENST00000417131 366 ntBASIC2.55□□□□□ -2
RFX3P48380 AC018630.2-202ENST00000422992 927 ntBASIC2.55□□□□□ -2
RFX3P48380 PPP1R11P2-201ENST00000423543 382 ntBASIC2.55□□□□□ -2
RFX3P48380 ARPC3P1-201ENST00000437218 533 ntBASIC2.55□□□□□ -2
RFX3P48380 AC107083.1-201ENST00000439643 279 ntBASIC2.55□□□□□ -2
RFX3P48380 SDCBPP1-201ENST00000440192 890 ntBASIC2.55□□□□□ -2
RFX3P48380 RPS24P13-201ENST00000442520 397 ntBASIC2.55□□□□□ -2
RFX3P48380 AC112653.1-201ENST00000443851 386 ntBASIC2.55□□□□□ -2
RFX3P48380 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.55□□□□□ -2
RFX3P48380 AC007327.1-201ENST00000447461 264 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms