Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.66□□□□□ -1.98
RORAP35398 SNORA31.21-201ENST00000517180 77 ntBASIC2.66□□□□□ -1.98
RORAP35398 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.66□□□□□ -1.98
RORAP35398 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.66□□□□□ -1.98
RORAP35398 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.66□□□□□ -1.98
RORAP35398 AL132657.2-201ENST00000564417 358 ntBASIC2.66□□□□□ -1.98
RORAP35398 HMGB1P6-201ENST00000569046 646 ntBASIC2.66□□□□□ -1.98
RORAP35398 AC013444.2-201ENST00000603317 787 ntBASIC2.66□□□□□ -1.98
RORAP35398 DUXAP11-201ENST00000603858 526 ntBASIC2.66□□□□□ -1.98
RORAP35398 AC007619.2-201ENST00000605743 379 ntBASIC2.66□□□□□ -1.98
RORAP35398 OR2AS2P-201ENST00000606902 342 ntBASIC2.66□□□□□ -1.98
RORAP35398 TUG1_1.1-201ENST00000610654 145 ntBASIC2.66□□□□□ -1.98
RORAP35398 PART1_2.1-201ENST00000612397 250 ntBASIC2.66□□□□□ -1.98
RORAP35398 AC243773.3-201ENST00000613270 256 ntBASIC2.66□□□□□ -1.98
RORAP35398 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.66□□□□□ -1.98
RORAP35398 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.66□□□□□ -1.98
RORAP35398 CRYM-AS1-204ENST00000637983 556 ntBASIC2.66□□□□□ -1.98
RORAP35398 AC013437.2-201ENST00000639587 677 ntBASIC2.66□□□□□ -1.98
RORAP35398 LINC02211-204ENST00000642024 1070 ntBASIC2.66□□□□□ -1.98
RORAP35398 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
RORAP35398 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.66□□□□□ -1.98
RORAP35398 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
RORAP35398 RNU1-105P-201ENST00000363470 161 ntBASIC2.65□□□□□ -1.99
RORAP35398 RNU6-198P-201ENST00000384258 104 ntBASIC2.65□□□□□ -1.99
RORAP35398 MIR9-1-201ENST00000385198 89 ntBASIC2.65□□□□□ -1.99
RORAP35398 RNU6-1197P-201ENST00000391183 107 ntBASIC2.65□□□□□ -1.99
RORAP35398 AL139095.1-201ENST00000404326 391 ntBASIC2.65□□□□□ -1.99
RORAP35398 RNU2-43P-201ENST00000410306 190 ntBASIC2.65□□□□□ -1.99
RORAP35398 RNU6-193P-201ENST00000410977 107 ntBASIC2.65□□□□□ -1.99
RORAP35398 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.65□□□□□ -1.99
RORAP35398 AC019097.1-201ENST00000424783 735 ntBASIC2.65□□□□□ -1.99
RORAP35398 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.65□□□□□ -1.99
RORAP35398 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.65□□□□□ -1.99
RORAP35398 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.65□□□□□ -1.99
RORAP35398 ARPC3P1-201ENST00000437218 533 ntBASIC2.65□□□□□ -1.99
RORAP35398 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.65□□□□□ -1.99
RORAP35398 RNF2P1-201ENST00000442955 1010 ntBASIC2.65□□□□□ -1.99
RORAP35398 AL358794.1-201ENST00000445689 381 ntBASIC2.65□□□□□ -1.99
RORAP35398 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
RORAP35398 MTCO3P11-201ENST00000455103 774 ntBASIC2.65□□□□□ -1.99
RORAP35398 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.65□□□□□ -1.99
RORAP35398 RPL21P41-201ENST00000459863 264 ntBASIC2.65□□□□□ -1.99
RORAP35398 AC104164.3-201ENST00000467363 1258 ntBASIC2.65□□□□□ -1.99
RORAP35398 AC114981.1-201ENST00000503897 678 ntBASIC2.65□□□□□ -1.99
RORAP35398 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
RORAP35398 AC114322.1-201ENST00000506771 926 ntBASIC2.65□□□□□ -1.99
RORAP35398 AL359273.1-201ENST00000510918 627 ntBASIC2.65□□□□□ -1.99
RORAP35398 AC017037.2-201ENST00000513850 890 ntBASIC2.65□□□□□ -1.99
RORAP35398 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.65□□□□□ -1.99
RORAP35398 RN7SKP40-201ENST00000517211 242 ntBASIC2.65□□□□□ -1.99
RORAP35398 AC005832.3-201ENST00000537929 631 ntBASIC2.65□□□□□ -1.99
RORAP35398 HPRT1P3-201ENST00000539521 576 ntBASIC2.65□□□□□ -1.99
RORAP35398 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
RORAP35398 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
RORAP35398 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.65□□□□□ -1.99
RORAP35398 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
RORAP35398 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.65□□□□□ -1.99
RORAP35398 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.65□□□□□ -1.99
RORAP35398 VN1R78P-201ENST00000597393 564 ntBASIC2.65□□□□□ -1.99
RORAP35398 AC004853.1-201ENST00000604902 698 ntBASIC2.65□□□□□ -1.99
RORAP35398 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.65□□□□□ -1.99
RORAP35398 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
RORAP35398 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.65□□□□□ -1.99
RORAP35398 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.65□□□□□ -1.99
RORAP35398 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
RORAP35398 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.99
RORAP35398 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
RORAP35398 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RORAP35398 AC008669.1-201ENST00000565823 2178 ntBASIC2.64□□□□□ -1.99
RORAP35398 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
RORAP35398 RNU6-1122P-201ENST00000384449 107 ntBASIC2.64□□□□□ -1.99
RORAP35398 SNORD116-12-201ENST00000384468 92 ntBASIC2.64□□□□□ -1.99
RORAP35398 AL138827.1-201ENST00000402666 306 ntBASIC2.64□□□□□ -1.99
RORAP35398 AL356057.2-201ENST00000403318 432 ntBASIC2.64□□□□□ -1.99
RORAP35398 AL590084.1-201ENST00000407885 387 ntBASIC2.64□□□□□ -1.99
RORAP35398 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.64□□□□□ -1.99
RORAP35398 RPL7P37-201ENST00000425095 738 ntBASIC2.64□□□□□ -1.99
RORAP35398 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.64□□□□□ -1.99
RORAP35398 AC234781.2-201ENST00000426370 994 ntBASIC2.64□□□□□ -1.99
RORAP35398 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.64□□□□□ -1.99
RORAP35398 AC092573.2-201ENST00000434546 243 ntBASIC2.64□□□□□ -1.99
RORAP35398 AC024082.2-201ENST00000434771 238 ntBASIC2.64□□□□□ -1.99
RORAP35398 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RORAP35398 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.64□□□□□ -1.99
RORAP35398 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.64□□□□□ -1.99
RORAP35398 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.64□□□□□ -1.99
RORAP35398 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.64□□□□□ -1.99
RORAP35398 SNORD109B-201ENST00000458961 67 ntBASIC2.64□□□□□ -1.99
RORAP35398 SNORD109A-201ENST00000459128 67 ntBASIC2.64□□□□□ -1.99
RORAP35398 AC103975.1-201ENST00000482506 483 ntBASIC2.64□□□□□ -1.99
RORAP35398 RPS15AP34-201ENST00000487776 387 ntBASIC2.64□□□□□ -1.99
RORAP35398 MTND3P3-201ENST00000505004 126 ntBASIC2.64□□□□□ -1.99
RORAP35398 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.64□□□□□ -1.99
RORAP35398 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.64□□□□□ -1.99
RORAP35398 AC109464.2-201ENST00000510242 943 ntBASIC2.64□□□□□ -1.99
RORAP35398 RNU6-583P-201ENST00000516012 92 ntBASIC2.64□□□□□ -1.99
RORAP35398 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.64□□□□□ -1.99
RORAP35398 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.64□□□□□ -1.99
RORAP35398 AC022861.1-201ENST00000522981 663 ntBASIC2.64□□□□□ -1.99
RORAP35398 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms