Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
BDNFP23560 MFSD8-233ENST00000641482 4860 ntBASIC3.62□□□□□ -1.83
BDNFP23560 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.62□□□□□ -1.83
BDNFP23560 RNA5SP267-201ENST00000364893 126 ntBASIC3.62□□□□□ -1.83
BDNFP23560 RPL7P10-201ENST00000417407 739 ntBASIC3.62□□□□□ -1.83
BDNFP23560 RPS15AP6-201ENST00000420703 385 ntBASIC3.62□□□□□ -1.83
BDNFP23560 AC098614.2-201ENST00000426040 255 ntBASIC3.62□□□□□ -1.83
BDNFP23560 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.62□□□□□ -1.83
BDNFP23560 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.62□□□□□ -1.83
BDNFP23560 AC005019.1-201ENST00000436455 431 ntBASIC3.62□□□□□ -1.83
BDNFP23560 Z73417.1-201ENST00000447373 778 ntBASIC3.62□□□□□ -1.83
BDNFP23560 AC104978.1-201ENST00000449387 391 ntBASIC3.62□□□□□ -1.83
BDNFP23560 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.62□□□□□ -1.83
BDNFP23560 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.62□□□□□ -1.83
BDNFP23560 FCF1P8-201ENST00000510322 597 ntBASIC3.62□□□□□ -1.83
BDNFP23560 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.62□□□□□ -1.83
BDNFP23560 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.62□□□□□ -1.83
BDNFP23560 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.62□□□□□ -1.83
BDNFP23560 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.62□□□□□ -1.83
BDNFP23560 RNA5SP290-201ENST00000517133 127 ntBASIC3.62□□□□□ -1.83
BDNFP23560 AP000907.2-201ENST00000530827 353 ntBASIC3.62□□□□□ -1.83
BDNFP23560 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.62□□□□□ -1.83
BDNFP23560 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.62□□□□□ -1.83
BDNFP23560 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.62□□□□□ -1.83
BDNFP23560 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.62□□□□□ -1.83
BDNFP23560 AC025281.1-201ENST00000567026 265 ntBASIC3.62□□□□□ -1.83
BDNFP23560 AC010653.1-201ENST00000571108 881 ntBASIC3.62□□□□□ -1.83
BDNFP23560 AL354943.1-201ENST00000572103 781 ntBASIC3.62□□□□□ -1.83
BDNFP23560 BNIP3P38-201ENST00000601117 544 ntBASIC3.62□□□□□ -1.83
BDNFP23560 AC006539.2-201ENST00000601729 572 ntBASIC3.62□□□□□ -1.83
BDNFP23560 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.62□□□□□ -1.83
BDNFP23560 FTX_3.1-201ENST00000610451 147 ntBASIC3.62□□□□□ -1.83
BDNFP23560 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.62□□□□□ -1.83
BDNFP23560 AC112204.3-201ENST00000623822 332 ntBASIC3.62□□□□□ -1.83
BDNFP23560 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.62□□□□□ -1.83
BDNFP23560 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BDNFP23560 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BDNFP23560 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.62□□□□□ -1.83
BDNFP23560 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.62□□□□□ -1.83
BDNFP23560 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BDNFP23560 ZNF833P-201ENST00000424938 1494 ntBASIC3.61□□□□□ -1.83
BDNFP23560 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BDNFP23560 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.61□□□□□ -1.83
BDNFP23560 AC032011.1-201ENST00000611703 1549 ntBASIC3.61□□□□□ -1.83
BDNFP23560 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BDNFP23560 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
BDNFP23560 RNA5SP197-201ENST00000363357 119 ntBASIC3.61□□□□□ -1.83
BDNFP23560 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.61□□□□□ -1.83
BDNFP23560 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BDNFP23560 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.61□□□□□ -1.83
BDNFP23560 AL158156.1-201ENST00000422509 473 ntBASIC3.61□□□□□ -1.83
BDNFP23560 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.61□□□□□ -1.83
BDNFP23560 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.61□□□□□ -1.83
BDNFP23560 AL117351.1-201ENST00000438864 766 ntBASIC3.61□□□□□ -1.83
BDNFP23560 AL831737.1-201ENST00000441288 271 ntBASIC3.61□□□□□ -1.83
BDNFP23560 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.61□□□□□ -1.83
BDNFP23560 RPL26P9-201ENST00000457466 433 ntBASIC3.61□□□□□ -1.83
BDNFP23560 AC004801.2-202ENST00000463559 283 ntBASIC3.61□□□□□ -1.83
BDNFP23560 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.61□□□□□ -1.83
BDNFP23560 AC113155.1-201ENST00000511141 769 ntBASIC3.61□□□□□ -1.83
BDNFP23560 AC022634.1-201ENST00000520765 532 ntBASIC3.61□□□□□ -1.83
BDNFP23560 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.61□□□□□ -1.83
BDNFP23560 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.61□□□□□ -1.83
BDNFP23560 AC087276.1-201ENST00000529659 480 ntBASIC3.61□□□□□ -1.83
BDNFP23560 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.61□□□□□ -1.83
BDNFP23560 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.61□□□□□ -1.83
BDNFP23560 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
BDNFP23560 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.61□□□□□ -1.83
BDNFP23560 AC090888.2-201ENST00000559765 1144 ntBASIC3.61□□□□□ -1.83
BDNFP23560 MIR544B-201ENST00000582372 78 ntBASIC3.61□□□□□ -1.83
BDNFP23560 AC022149.2-201ENST00000621061 203 ntBASIC3.61□□□□□ -1.83
BDNFP23560 AC127502.3-201ENST00000636170 1206 ntBASIC3.61□□□□□ -1.83
BDNFP23560 MTND5P1-201ENST00000445440 1375 ntBASIC3.61□□□□□ -1.83
BDNFP23560 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.61□□□□□ -1.83
BDNFP23560 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
BDNFP23560 CR848007.1-201ENST00000442354 1699 ntBASIC3.6□□□□□ -1.83
BDNFP23560 Y_RNA.245-201ENST00000364493 95 ntBASIC3.6□□□□□ -1.83
BDNFP23560 MIR19A-201ENST00000384878 82 ntBASIC3.6□□□□□ -1.83
BDNFP23560 RN7SKP111-201ENST00000410349 271 ntBASIC3.6□□□□□ -1.83
BDNFP23560 AC005300.1-201ENST00000428401 373 ntBASIC3.6□□□□□ -1.83
BDNFP23560 AL354941.1-201ENST00000438600 464 ntBASIC3.6□□□□□ -1.83
BDNFP23560 AL357552.1-201ENST00000445254 415 ntBASIC3.6□□□□□ -1.83
BDNFP23560 RPS29P31-201ENST00000446147 164 ntBASIC3.6□□□□□ -1.83
BDNFP23560 AC020550.1-201ENST00000447385 163 ntBASIC3.6□□□□□ -1.83
BDNFP23560 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.6□□□□□ -1.83
BDNFP23560 AC020699.1-201ENST00000505161 445 ntBASIC3.6□□□□□ -1.83
BDNFP23560 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.6□□□□□ -1.83
BDNFP23560 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.6□□□□□ -1.83
BDNFP23560 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
BDNFP23560 AC013828.2-201ENST00000532487 235 ntBASIC3.6□□□□□ -1.83
BDNFP23560 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.6□□□□□ -1.83
BDNFP23560 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.6□□□□□ -1.83
BDNFP23560 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
BDNFP23560 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.6□□□□□ -1.83
BDNFP23560 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.6□□□□□ -1.83
BDNFP23560 AC128657.1-201ENST00000549459 145 ntBASIC3.6□□□□□ -1.83
BDNFP23560 AL391261.3-201ENST00000557194 520 ntBASIC3.6□□□□□ -1.83
BDNFP23560 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.6□□□□□ -1.83
BDNFP23560 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.6□□□□□ -1.83
BDNFP23560 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms