Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.31□□□□□ -1.88
CDH3P22223 OR2B8P-201ENST00000432841 938 ntBASIC3.31□□□□□ -1.88
CDH3P22223 RPL37P21-201ENST00000435890 276 ntBASIC3.31□□□□□ -1.88
CDH3P22223 AC129850.1-201ENST00000436203 508 ntBASIC3.31□□□□□ -1.88
CDH3P22223 FAM103A2P-201ENST00000444122 354 ntBASIC3.31□□□□□ -1.88
CDH3P22223 RPL7P36-201ENST00000444633 681 ntBASIC3.31□□□□□ -1.88
CDH3P22223 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.31□□□□□ -1.88
CDH3P22223 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.31□□□□□ -1.88
CDH3P22223 AC034222.1-201ENST00000494052 532 ntBASIC3.31□□□□□ -1.88
CDH3P22223 AL358832.1-201ENST00000497800 389 ntBASIC3.31□□□□□ -1.88
CDH3P22223 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH3P22223 AC105313.1-201ENST00000509121 353 ntBASIC3.31□□□□□ -1.88
CDH3P22223 IGKV2-26-201ENST00000518305 343 ntBASIC3.31□□□□□ -1.88
CDH3P22223 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.31□□□□□ -1.88
CDH3P22223 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.31□□□□□ -1.88
CDH3P22223 AC018630.1-201ENST00000541376 925 ntBASIC3.31□□□□□ -1.88
CDH3P22223 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.31□□□□□ -1.88
CDH3P22223 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.31□□□□□ -1.88
CDH3P22223 MTCO3P24-201ENST00000572729 782 ntBASIC3.31□□□□□ -1.88
CDH3P22223 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.31□□□□□ -1.88
CDH3P22223 PRELID3BP8-201ENST00000604148 295 ntBASIC3.31□□□□□ -1.88
CDH3P22223 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.31□□□□□ -1.88
CDH3P22223 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
CDH3P22223 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.31□□□□□ -1.88
CDH3P22223 AL049781.1-201ENST00000623195 3585 ntBASIC3.31□□□□□ -1.88
CDH3P22223 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDH3P22223 CCT4P2-201ENST00000233836 1548 ntBASIC3.3□□□□□ -1.88
CDH3P22223 AC068647.1-201ENST00000489539 2265 ntBASIC3.3□□□□□ -1.88
CDH3P22223 MTCYBP36-201ENST00000404146 440 ntBASIC3.3□□□□□ -1.88
CDH3P22223 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH3P22223 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.3□□□□□ -1.88
CDH3P22223 MRPL50P2-201ENST00000416821 482 ntBASIC3.3□□□□□ -1.88
CDH3P22223 AL365338.1-201ENST00000422282 858 ntBASIC3.3□□□□□ -1.88
CDH3P22223 AC079780.1-201ENST00000428259 207 ntBASIC3.3□□□□□ -1.88
CDH3P22223 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH3P22223 AC109583.1-201ENST00000432156 268 ntBASIC3.3□□□□□ -1.88
CDH3P22223 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH3P22223 BMI1P1-201ENST00000445879 941 ntBASIC3.3□□□□□ -1.88
CDH3P22223 AC093392.2-201ENST00000450682 337 ntBASIC3.3□□□□□ -1.88
CDH3P22223 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH3P22223 AC008155.2-201ENST00000464337 397 ntBASIC3.3□□□□□ -1.88
CDH3P22223 RN7SL601P-201ENST00000471221 293 ntBASIC3.3□□□□□ -1.88
CDH3P22223 AC080014.1-201ENST00000496877 1201 ntBASIC3.3□□□□□ -1.88
CDH3P22223 AC096751.1-202ENST00000502691 1067 ntBASIC3.3□□□□□ -1.88
CDH3P22223 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CDH3P22223 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CDH3P22223 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH3P22223 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH3P22223 AC117532.1-201ENST00000514638 323 ntBASIC3.3□□□□□ -1.88
CDH3P22223 RNU6-528P-201ENST00000516926 100 ntBASIC3.3□□□□□ -1.88
CDH3P22223 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.3□□□□□ -1.88
CDH3P22223 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH3P22223 AC026333.2-201ENST00000542164 106 ntBASIC3.3□□□□□ -1.88
CDH3P22223 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH3P22223 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH3P22223 AC012414.6-201ENST00000568241 401 ntBASIC3.3□□□□□ -1.88
CDH3P22223 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH3P22223 AL031985.2-201ENST00000600955 480 ntBASIC3.3□□□□□ -1.88
CDH3P22223 AP001981.2-201ENST00000603241 418 ntBASIC3.3□□□□□ -1.88
CDH3P22223 AL031176.1-201ENST00000604554 466 ntBASIC3.3□□□□□ -1.88
CDH3P22223 AC008962.1-201ENST00000605729 304 ntBASIC3.3□□□□□ -1.88
CDH3P22223 AC080013.6-201ENST00000606185 215 ntBASIC3.3□□□□□ -1.88
CDH3P22223 AC091965.4-201ENST00000607691 587 ntBASIC3.3□□□□□ -1.88
CDH3P22223 AC004832.5-201ENST00000608677 401 ntBASIC3.3□□□□□ -1.88
CDH3P22223 AC096577.2-201ENST00000611455 153 ntBASIC3.3□□□□□ -1.88
CDH3P22223 AC073114.1-201ENST00000612027 490 ntBASIC3.3□□□□□ -1.88
CDH3P22223 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH3P22223 AC002076.2-201ENST00000617362 122 ntBASIC3.3□□□□□ -1.88
CDH3P22223 Z69908.1-201ENST00000622603 247 ntBASIC3.3□□□□□ -1.88
CDH3P22223 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.3□□□□□ -1.88
CDH3P22223 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH3P22223 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH3P22223 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.3□□□□□ -1.88
CDH3P22223 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CDH3P22223 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH3P22223 AL513185.3-201ENST00000433335 1300 ntBASIC3.29□□□□□ -1.88
CDH3P22223 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CDH3P22223 FRG1BP-201ENST00000278882 761 ntBASIC3.29□□□□□ -1.88
CDH3P22223 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH3P22223 RNA5SP267-201ENST00000364893 126 ntBASIC3.29□□□□□ -1.88
CDH3P22223 SNORD116-9-201ENST00000384000 95 ntBASIC3.29□□□□□ -1.88
CDH3P22223 SNORD116-3-201ENST00000384287 95 ntBASIC3.29□□□□□ -1.88
CDH3P22223 SNORD116-7-201ENST00000384404 95 ntBASIC3.29□□□□□ -1.88
CDH3P22223 SNORD116-5-201ENST00000384462 95 ntBASIC3.29□□□□□ -1.88
CDH3P22223 MIR135A2-201ENST00000384854 100 ntBASIC3.29□□□□□ -1.88
CDH3P22223 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CDH3P22223 SNORA11.1-201ENST00000408133 129 ntBASIC3.29□□□□□ -1.88
CDH3P22223 AL158156.1-201ENST00000422509 473 ntBASIC3.29□□□□□ -1.88
CDH3P22223 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH3P22223 MTATP6P4-201ENST00000427725 675 ntBASIC3.29□□□□□ -1.88
CDH3P22223 MTND4P32-201ENST00000437189 1237 ntBASIC3.29□□□□□ -1.88
CDH3P22223 RABEPKP1-201ENST00000440529 1026 ntBASIC3.29□□□□□ -1.88
CDH3P22223 AL357552.1-201ENST00000445254 415 ntBASIC3.29□□□□□ -1.88
CDH3P22223 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.29□□□□□ -1.88
CDH3P22223 HMGN1P18-201ENST00000457642 277 ntBASIC3.29□□□□□ -1.88
CDH3P22223 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.29□□□□□ -1.88
CDH3P22223 AC108860.1-201ENST00000484521 383 ntBASIC3.29□□□□□ -1.88
CDH3P22223 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDH3P22223 HSPD1P15-201ENST00000505573 1122 ntBASIC3.29□□□□□ -1.88
CDH3P22223 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms