Protein–RNA interactions for Protein: P20929

NEB, Nebulin, humanhuman

Predictions only

Length 6,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEBP20929 AC104564.1-201ENST00000493028 407 ntBASIC0.66□□□□□ -2.3
NEBP20929 Y_RNA.453-201ENST00000384223 109 ntBASIC0.66□□□□□ -2.3
NEBP20929 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
NEBP20929 RN7SKP101-201ENST00000411376 320 ntBASIC0.66□□□□□ -2.3
NEBP20929 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.66□□□□□ -2.3
NEBP20929 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC0.66□□□□□ -2.3
NEBP20929 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC0.66□□□□□ -2.3
NEBP20929 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC0.66□□□□□ -2.3
NEBP20929 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.66□□□□□ -2.3
NEBP20929 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.66□□□□□ -2.3
NEBP20929 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
NEBP20929 MIR518A2-201ENST00000384966 87 ntBASIC0.66□□□□□ -2.3
NEBP20929 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC0.66□□□□□ -2.3
NEBP20929 SNORD54-201ENST00000459159 67 ntBASIC0.66□□□□□ -2.3
NEBP20929 RN7SL274P-201ENST00000492268 272 ntBASIC0.66□□□□□ -2.3
NEBP20929 OR7K1P-201ENST00000546439 926 ntBASIC0.66□□□□□ -2.3
NEBP20929 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.66□□□□□ -2.3
NEBP20929 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
NEBP20929 MTND4P23-201ENST00000447723 1363 ntBASIC0.66□□□□□ -2.3
NEBP20929 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
NEBP20929 AL606923.1-201ENST00000406616 190 ntBASIC0.66□□□□□ -2.3
NEBP20929 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.66□□□□□ -2.3
NEBP20929 AL118520.1-201ENST00000450770 291 ntBASIC0.66□□□□□ -2.3
NEBP20929 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
NEBP20929 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.66□□□□□ -2.3
NEBP20929 Y_RNA.659-201ENST00000515994 113 ntBASIC0.66□□□□□ -2.3
NEBP20929 IGLVI-20-201ENST00000519296 130 ntBASIC0.66□□□□□ -2.3
NEBP20929 DEFB108E-201ENST00000524692 240 ntBASIC0.66□□□□□ -2.3
NEBP20929 AC006270.3-201ENST00000605967 1036 ntBASIC0.66□□□□□ -2.3
NEBP20929 AC103858.2-201ENST00000621471 543 ntBASIC0.66□□□□□ -2.3
NEBP20929 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
NEBP20929 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.65□□□□□ -2.3
NEBP20929 OR11H5P-202ENST00000641612 1325 ntBASIC0.65□□□□□ -2.3
NEBP20929 SNORD114-23-201ENST00000363536 72 ntBASIC0.65□□□□□ -2.3
NEBP20929 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC0.65□□□□□ -2.3
NEBP20929 RPS29P29-201ENST00000456396 171 ntBASIC0.65□□□□□ -2.3
NEBP20929 RPL21P131-201ENST00000497298 483 ntBASIC0.65□□□□□ -2.3
NEBP20929 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC0.65□□□□□ -2.3
NEBP20929 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC0.65□□□□□ -2.3
NEBP20929 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC0.65□□□□□ -2.3
NEBP20929 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
NEBP20929 RNF6P1-201ENST00000444889 1784 ntBASIC0.65□□□□□ -2.31
NEBP20929 RNY4P6-201ENST00000363667 96 ntBASIC0.65□□□□□ -2.31
NEBP20929 Y_RNA.514-201ENST00000384528 112 ntBASIC0.65□□□□□ -2.31
NEBP20929 AC004263.1-201ENST00000479327 332 ntBASIC0.65□□□□□ -2.31
NEBP20929 AC021146.7-201ENST00000509604 775 ntBASIC0.65□□□□□ -2.31
NEBP20929 AC104986.1-201ENST00000517978 436 ntBASIC0.65□□□□□ -2.31
NEBP20929 AP000857.1-201ENST00000532151 543 ntBASIC0.65□□□□□ -2.31
NEBP20929 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC0.65□□□□□ -2.31
NEBP20929 AL353746.1-201ENST00000566293 6881 ntBASIC0.65□□□□□ -2.31
NEBP20929 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
NEBP20929 AL596028.1-201ENST00000326971 197 ntBASIC0.65□□□□□ -2.31
NEBP20929 RNU6-55P-201ENST00000411092 107 ntBASIC0.65□□□□□ -2.31
NEBP20929 RNU6-954P-201ENST00000411355 107 ntBASIC0.65□□□□□ -2.31
NEBP20929 HMGB3P8-201ENST00000449709 577 ntBASIC0.65□□□□□ -2.31
NEBP20929 AK3P2-201ENST00000507976 429 ntBASIC0.65□□□□□ -2.31
NEBP20929 SNORA64.4-201ENST00000516632 81 ntBASIC0.65□□□□□ -2.31
NEBP20929 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC0.65□□□□□ -2.31
NEBP20929 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.65□□□□□ -2.31
NEBP20929 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC0.65□□□□□ -2.31
NEBP20929 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.31
NEBP20929 GTF2IP23-201ENST00000423746 351 ntBASIC0.65□□□□□ -2.31
NEBP20929 UBE2V2P1-201ENST00000434717 398 ntBASIC0.65□□□□□ -2.31
NEBP20929 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC0.65□□□□□ -2.31
NEBP20929 MTND6P13-201ENST00000443510 523 ntBASIC0.65□□□□□ -2.31
NEBP20929 GSTA11P-201ENST00000452866 669 ntBASIC0.65□□□□□ -2.31
NEBP20929 RPL26P9-201ENST00000457466 433 ntBASIC0.65□□□□□ -2.31
NEBP20929 AC010678.1-201ENST00000614118 713 ntBASIC0.65□□□□□ -2.31
NEBP20929 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC0.65□□□□□ -2.31
NEBP20929 MIR6513-201ENST00000621188 64 ntBASIC0.65□□□□□ -2.31
NEBP20929 AC130454.1-201ENST00000622948 401 ntBASIC0.65□□□□□ -2.31
NEBP20929 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
NEBP20929 OR5H6-203ENST00000642105 978 ntBASIC0.65□□□□□ -2.31
NEBP20929 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC0.65□□□□□ -2.31
NEBP20929 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.65□□□□□ -2.31
NEBP20929 RNA5SP103-201ENST00000459503 118 ntBASIC0.65□□□□□ -2.31
NEBP20929 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.65□□□□□ -2.31
NEBP20929 AC009901.1-201ENST00000506703 541 ntBASIC0.65□□□□□ -2.31
NEBP20929 FABP5P12-201ENST00000515543 389 ntBASIC0.65□□□□□ -2.31
NEBP20929 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.65□□□□□ -2.31
NEBP20929 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC0.65□□□□□ -2.31
NEBP20929 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
NEBP20929 Y_RNA.421-201ENST00000384052 101 ntBASIC0.64□□□□□ -2.31
NEBP20929 Y_RNA.475-201ENST00000384345 101 ntBASIC0.64□□□□□ -2.31
NEBP20929 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC0.64□□□□□ -2.31
NEBP20929 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.64□□□□□ -2.31
NEBP20929 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC0.64□□□□□ -2.31
NEBP20929 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.64□□□□□ -2.31
NEBP20929 AC078899.5-201ENST00000612475 178 ntBASIC0.64□□□□□ -2.31
NEBP20929 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
NEBP20929 Y_RNA.172-201ENST00000363765 102 ntBASIC0.64□□□□□ -2.31
NEBP20929 RNU6-1126P-201ENST00000384002 107 ntBASIC0.64□□□□□ -2.31
NEBP20929 RPL23AP29-201ENST00000397284 453 ntBASIC0.64□□□□□ -2.31
NEBP20929 SKINT1L-201ENST00000401057 817 ntBASIC0.64□□□□□ -2.31
NEBP20929 AC244636.1-201ENST00000421152 228 ntBASIC0.64□□□□□ -2.31
NEBP20929 Z85994.2-201ENST00000434327 452 ntBASIC0.64□□□□□ -2.31
NEBP20929 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC0.64□□□□□ -2.31
NEBP20929 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC0.64□□□□□ -2.31
NEBP20929 HSPE1P4-201ENST00000550617 308 ntBASIC0.64□□□□□ -2.31
NEBP20929 AC103968.1-201ENST00000557841 573 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms