Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MIR19A-201ENST00000384878 82 ntBASIC3.3□□□□□ -1.88
ERCC2P18074 U8.14-201ENST00000390843 143 ntBASIC3.3□□□□□ -1.88
ERCC2P18074 RPL31P12-201ENST00000422587 358 ntBASIC3.3□□□□□ -1.88
ERCC2P18074 AC234781.2-201ENST00000426370 994 ntBASIC3.3□□□□□ -1.88
ERCC2P18074 MTND5P25-201ENST00000430499 799 ntBASIC3.3□□□□□ -1.88
ERCC2P18074 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.3□□□□□ -1.88
ERCC2P18074 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.3□□□□□ -1.88
ERCC2P18074 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.3□□□□□ -1.88
ERCC2P18074 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.3□□□□□ -1.88
ERCC2P18074 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.3□□□□□ -1.88
ERCC2P18074 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.3□□□□□ -1.88
ERCC2P18074 RPL32P34-201ENST00000486380 400 ntBASIC3.3□□□□□ -1.88
ERCC2P18074 AC055855.1-201ENST00000489563 579 ntBASIC3.3□□□□□ -1.88
ERCC2P18074 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.3□□□□□ -1.88
ERCC2P18074 RNU1-143P-201ENST00000516296 146 ntBASIC3.3□□□□□ -1.88
ERCC2P18074 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.3□□□□□ -1.88
ERCC2P18074 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.3□□□□□ -1.88
ERCC2P18074 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.3□□□□□ -1.88
ERCC2P18074 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.3□□□□□ -1.88
ERCC2P18074 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.3□□□□□ -1.88
ERCC2P18074 AC007954.1-201ENST00000554198 494 ntBASIC3.3□□□□□ -1.88
ERCC2P18074 AL355836.1-201ENST00000555951 870 ntBASIC3.3□□□□□ -1.88
ERCC2P18074 AL133153.1-201ENST00000557756 303 ntBASIC3.3□□□□□ -1.88
ERCC2P18074 AL158211.1-201ENST00000566763 763 ntBASIC3.3□□□□□ -1.88
ERCC2P18074 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.3□□□□□ -1.88
ERCC2P18074 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.3□□□□□ -1.88
ERCC2P18074 AL031985.2-201ENST00000600955 480 ntBASIC3.3□□□□□ -1.88
ERCC2P18074 AC018638.7-201ENST00000605836 1114 ntBASIC3.3□□□□□ -1.88
ERCC2P18074 U1.23-201ENST00000610293 146 ntBASIC3.3□□□□□ -1.88
ERCC2P18074 RNU1-68P-201ENST00000615382 146 ntBASIC3.3□□□□□ -1.88
ERCC2P18074 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.3□□□□□ -1.88
ERCC2P18074 U1.39-201ENST00000621562 146 ntBASIC3.3□□□□□ -1.88
ERCC2P18074 AL356266.1-201ENST00000623311 483 ntBASIC3.3□□□□□ -1.88
ERCC2P18074 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.3□□□□□ -1.88
ERCC2P18074 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
ERCC2P18074 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.3□□□□□ -1.88
ERCC2P18074 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.3□□□□□ -1.88
ERCC2P18074 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
ERCC2P18074 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.3□□□□□ -1.88
ERCC2P18074 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.3□□□□□ -1.88
ERCC2P18074 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ERCC2P18074 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
ERCC2P18074 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ERCC2P18074 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ERCC2P18074 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
ERCC2P18074 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ERCC2P18074 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ERCC2P18074 RNU6-223P-201ENST00000362830 107 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 Y_RNA.97-201ENST00000363094 102 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 RNA5SP72-201ENST00000364442 117 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ERCC2P18074 RNU1-101P-201ENST00000391171 127 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 TXNP7-201ENST00000406296 293 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ERCC2P18074 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.29□□□□□ -1.88
ERCC2P18074 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ERCC2P18074 BX890604.2-201ENST00000427883 474 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.29□□□□□ -1.88
ERCC2P18074 AL512649.1-201ENST00000428997 581 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.29□□□□□ -1.88
ERCC2P18074 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.29□□□□□ -1.88
ERCC2P18074 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.29□□□□□ -1.88
ERCC2P18074 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.29□□□□□ -1.88
ERCC2P18074 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.29□□□□□ -1.88
ERCC2P18074 RNU7-125P-201ENST00000458760 62 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 RPS20P20-201ENST00000460498 340 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.29□□□□□ -1.88
ERCC2P18074 AC068587.2-201ENST00000478386 781 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 AC114967.1-201ENST00000504890 259 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.29□□□□□ -1.88
ERCC2P18074 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.29□□□□□ -1.88
ERCC2P18074 AC074250.1-201ENST00000511117 192 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 SNORD59.2-201ENST00000516873 68 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.29□□□□□ -1.88
ERCC2P18074 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
ERCC2P18074 AC124947.2-202ENST00000552735 133 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 AC008015.1-201ENST00000555505 465 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.29□□□□□ -1.88
ERCC2P18074 AC074050.1-201ENST00000563247 211 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 AC012435.1-202ENST00000568772 240 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 AF038458.1-201ENST00000588406 262 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 AL606834.2-201ENST00000602954 668 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 PRELID3BP8-201ENST00000604148 295 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 AC007038.2-201ENST00000608095 740 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.29□□□□□ -1.88
ERCC2P18074 AC004223.4-201ENST00000612426 332 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 uc_338.25-201ENST00000613756 156 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 AC013476.2-201ENST00000614456 459 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.29□□□□□ -1.88
ERCC2P18074 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 SNORA50A-202ENST00000629536 136 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.29□□□□□ -1.88
ERCC2P18074 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ERCC2P18074 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ERCC2P18074 MAPK10-322ENST00000641485 4530 ntBASIC3.29□□□□□ -1.88
ERCC2P18074 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ERCC2P18074 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.29□□□□□ -1.88
ERCC2P18074 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
ERCC2P18074 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms