Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.25□□□□□ -2.05
MT-ND4P03905 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.25□□□□□ -2.05
MT-ND4P03905 CR769767.1-201ENST00000436337 346 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
MT-ND4P03905 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.25□□□□□ -2.05
MT-ND4P03905 RPS12P2-201ENST00000439728 269 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 SDCBPP1-201ENST00000440192 890 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.25□□□□□ -2.05
MT-ND4P03905 RSL24D1P3-201ENST00000449255 495 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 RPL18AP17-201ENST00000455326 198 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 AL049714.1-201ENST00000466686 347 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 RPS15AP34-201ENST00000487776 387 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
MT-ND4P03905 OR5BM1P-201ENST00000512021 366 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 AC022483.1-201ENST00000514020 567 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.25□□□□□ -2.05
MT-ND4P03905 RNY4P37-201ENST00000516225 96 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 CKS1BP7-201ENST00000522230 235 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.25□□□□□ -2.05
MT-ND4P03905 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.25□□□□□ -2.05
MT-ND4P03905 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
MT-ND4P03905 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.25□□□□□ -2.05
MT-ND4P03905 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.25□□□□□ -2.05
MT-ND4P03905 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.25□□□□□ -2.05
MT-ND4P03905 CYCSP39-201ENST00000565821 309 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.25□□□□□ -2.05
MT-ND4P03905 MIR3921-201ENST00000577308 85 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 MIR3609-201ENST00000582661 80 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 AL035413.2-201ENST00000604801 525 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 DUXAP10-204ENST00000612052 616 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.25□□□□□ -2.05
MT-ND4P03905 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.25□□□□□ -2.05
MT-ND4P03905 AC008669.1-201ENST00000565823 2178 ntBASIC2.25□□□□□ -2.05
MT-ND4P03905 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.24□□□□□ -2.05
MT-ND4P03905 SNORD46.1-201ENST00000364139 104 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 RNU6-343P-201ENST00000364709 104 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 U8.8-201ENST00000365399 135 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 RNU6-1122P-201ENST00000384449 107 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 SNORA44-201ENST00000384584 132 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 AL031679.1-201ENST00000400616 525 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 HMGB1P17-201ENST00000403495 628 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 RNA5SP21-201ENST00000410917 96 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 AC087499.2-201ENST00000432861 149 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.24□□□□□ -2.05
MT-ND4P03905 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.24□□□□□ -2.05
MT-ND4P03905 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 AC104982.1-201ENST00000478775 574 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.24□□□□□ -2.05
MT-ND4P03905 AC113347.3-201ENST00000509113 148 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 XKRY-201ENST00000510392 1100 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 AC006499.2-201ENST00000513470 337 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 RNU6-276P-201ENST00000516114 96 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 RNA5SP471-201ENST00000516971 106 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 SNORA31.21-201ENST00000517180 77 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 SNORA31.22-201ENST00000517204 135 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 RNU1-104P-201ENST00000517280 175 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.24□□□□□ -2.05
MT-ND4P03905 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
MT-ND4P03905 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
MT-ND4P03905 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.24□□□□□ -2.05
MT-ND4P03905 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.24□□□□□ -2.05
MT-ND4P03905 AL132657.2-201ENST00000564417 358 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 AC010546.1-201ENST00000569391 485 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 AC090079.2-201ENST00000575289 768 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.24□□□□□ -2.05
MT-ND4P03905 BNIP3P31-201ENST00000604515 566 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 AC093732.2-201ENST00000607950 274 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 AL392048.1-201ENST00000613946 534 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.24□□□□□ -2.05
MT-ND4P03905 OR1S1-201ENST00000624470 978 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 AL138960.2-201ENST00000625145 535 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.24□□□□□ -2.05
MT-ND4P03905 AC106858.1-201ENST00000637497 429 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 AL356473.1-201ENST00000406203 1408 ntBASIC2.24□□□□□ -2.05
MT-ND4P03905 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.24□□□□□ -2.05
MT-ND4P03905 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.24□□□□□ -2.05
MT-ND4P03905 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
MT-ND4P03905 RNU6-28P-201ENST00000362378 107 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 RNU1-112P-201ENST00000364401 164 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 Y_RNA.472-201ENST00000384322 102 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 AL590084.1-201ENST00000407885 387 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 MTATP6P19-201ENST00000413797 659 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 TPMTP2-201ENST00000414372 726 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 MTCO2P5-201ENST00000422621 426 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.23□□□□□ -2.05
MT-ND4P03905 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.23□□□□□ -2.05
MT-ND4P03905 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.23□□□□□ -2.05
MT-ND4P03905 AC090774.1-201ENST00000435925 246 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 RNF2P1-201ENST00000442955 1010 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 AL135938.1-201ENST00000443141 297 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 AC009296.1-201ENST00000443146 155 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.23□□□□□ -2.05
MT-ND4P03905 AC147055.4-201ENST00000504399 745 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.23□□□□□ -2.05
MT-ND4P03905 AC008837.2-201ENST00000513076 418 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.23□□□□□ -2.05
MT-ND4P03905 SNORA31.11-201ENST00000516528 139 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.23□□□□□ -2.05
MT-ND4P03905 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms