Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RNU6-198P-201ENST00000384258 104 ntBASIC1.3□□□□□ -2.2
SPTA1P02549 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC1.3□□□□□ -2.2
SPTA1P02549 AL357078.2-201ENST00000416486 427 ntBASIC1.3□□□□□ -2.2
SPTA1P02549 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.3□□□□□ -2.2
SPTA1P02549 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.3□□□□□ -2.2
SPTA1P02549 MIR3935-201ENST00000583472 104 ntBASIC1.3□□□□□ -2.2
SPTA1P02549 AL109933.3-201ENST00000619095 188 ntBASIC1.3□□□□□ -2.2
SPTA1P02549 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.3□□□□□ -2.2
SPTA1P02549 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SPTA1P02549 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SPTA1P02549 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SPTA1P02549 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.3□□□□□ -2.2
SPTA1P02549 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SPTA1P02549 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SPTA1P02549 RNA5SP295-201ENST00000362655 121 ntBASIC1.29□□□□□ -2.2
SPTA1P02549 RNU6-146P-201ENST00000384602 108 ntBASIC1.29□□□□□ -2.2
SPTA1P02549 RNU6-178P-201ENST00000384631 104 ntBASIC1.29□□□□□ -2.2
SPTA1P02549 RPL5P19-201ENST00000404228 893 ntBASIC1.29□□□□□ -2.2
SPTA1P02549 RN7SKP200-201ENST00000410564 320 ntBASIC1.29□□□□□ -2.2
SPTA1P02549 SEC63P1-201ENST00000425785 1258 ntBASIC1.29□□□□□ -2.2
SPTA1P02549 AC022431.1-201ENST00000450941 438 ntBASIC1.29□□□□□ -2.2
SPTA1P02549 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTA1P02549 AC023825.1-201ENST00000566704 1030 ntBASIC1.29□□□□□ -2.2
SPTA1P02549 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.29□□□□□ -2.2
SPTA1P02549 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
SPTA1P02549 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SPTA1P02549 MIR591-201ENST00000385290 95 ntBASIC1.29□□□□□ -2.2
SPTA1P02549 RPL17P12-201ENST00000413391 526 ntBASIC1.29□□□□□ -2.2
SPTA1P02549 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTA1P02549 AIMP1P2-201ENST00000425294 312 ntBASIC1.29□□□□□ -2.2
SPTA1P02549 AC109583.1-201ENST00000432156 268 ntBASIC1.29□□□□□ -2.2
SPTA1P02549 AL591212.2-201ENST00000433923 257 ntBASIC1.29□□□□□ -2.2
SPTA1P02549 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTA1P02549 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTA1P02549 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTA1P02549 AC139103.1-201ENST00000534696 1030 ntBASIC1.29□□□□□ -2.2
SPTA1P02549 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTA1P02549 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTA1P02549 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.29□□□□□ -2.2
SPTA1P02549 AC090617.7-201ENST00000623952 126 ntBASIC1.29□□□□□ -2.2
SPTA1P02549 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
SPTA1P02549 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.28□□□□□ -2.2
SPTA1P02549 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.28□□□□□ -2.2
SPTA1P02549 AC004223.1-201ENST00000479840 271 ntBASIC1.28□□□□□ -2.2
SPTA1P02549 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.28□□□□□ -2.2
SPTA1P02549 PRELID2P1-201ENST00000552837 301 ntBASIC1.28□□□□□ -2.2
SPTA1P02549 OR4K8P-201ENST00000578842 1048 ntBASIC1.28□□□□□ -2.2
SPTA1P02549 RPL23AP88-201ENST00000605759 454 ntBASIC1.28□□□□□ -2.2
SPTA1P02549 AC005156.1-201ENST00000613371 573 ntBASIC1.28□□□□□ -2.2
SPTA1P02549 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
SPTA1P02549 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.28□□□□□ -2.2
SPTA1P02549 U8.1-201ENST00000362843 134 ntBASIC1.28□□□□□ -2.2
SPTA1P02549 RNA5SP489-201ENST00000410986 109 ntBASIC1.28□□□□□ -2.2
SPTA1P02549 HMGN2P38-201ENST00000423806 265 ntBASIC1.28□□□□□ -2.2
SPTA1P02549 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.28□□□□□ -2.2
SPTA1P02549 HMGB1P45-201ENST00000435986 653 ntBASIC1.28□□□□□ -2.2
SPTA1P02549 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SPTA1P02549 RPS15AP1-201ENST00000457423 391 ntBASIC1.28□□□□□ -2.2
SPTA1P02549 HMGN1P8-201ENST00000463578 288 ntBASIC1.28□□□□□ -2.2
SPTA1P02549 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SPTA1P02549 AP005435.4-201ENST00000529514 284 ntBASIC1.28□□□□□ -2.2
SPTA1P02549 Xist_exon1.1-201ENST00000618930 85 ntBASIC1.28□□□□□ -2.2
SPTA1P02549 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
SPTA1P02549 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SPTA1P02549 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SPTA1P02549 AC012321.1-201ENST00000561622 1588 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 MIR373-201ENST00000362273 69 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
SPTA1P02549 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTA1P02549 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.27□□□□□ -2.21
SPTA1P02549 RPL31P35-201ENST00000431058 377 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTA1P02549 AC087190.1-201ENST00000484462 480 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 AC090453.1-201ENST00000495560 436 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC1.27□□□□□ -2.21
SPTA1P02549 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTA1P02549 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.27□□□□□ -2.21
SPTA1P02549 RNU6-113P-201ENST00000516653 101 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 RNU6-56P-201ENST00000516986 93 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTA1P02549 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTA1P02549 AL133393.1-201ENST00000603277 287 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 AC132825.8-201ENST00000640783 297 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
SPTA1P02549 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.27□□□□□ -2.21
SPTA1P02549 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.27□□□□□ -2.21
SPTA1P02549 TRAPPC2P10-201ENST00000415662 323 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTA1P02549 CBX3P6-201ENST00000430257 527 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 MTCYBP12-201ENST00000440559 1134 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 AL078601.1-201ENST00000444542 271 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 AL139109.1-201ENST00000455491 297 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.27□□□□□ -2.21
SPTA1P02549 AP000873.1-201ENST00000463987 400 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 RPS26P21-201ENST00000475397 348 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 AC135999.1-201ENST00000478962 479 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 MTCO2P9-201ENST00000503214 694 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 RNU6-405P-201ENST00000516637 110 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 RNU6-467P-201ENST00000517027 110 ntBASIC1.27□□□□□ -2.21
SPTA1P02549 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms