Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LDLRP01130 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LDLRP01130 Y_RNA.97-201ENST00000363094 102 ntBASIC3.51□□□□□ -1.85
LDLRP01130 SNORA51.2-201ENST00000364595 132 ntBASIC3.51□□□□□ -1.85
LDLRP01130 SNORD3H-201ENST00000384486 214 ntBASIC3.51□□□□□ -1.85
LDLRP01130 Y_RNA.548-201ENST00000384656 105 ntBASIC3.51□□□□□ -1.85
LDLRP01130 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LDLRP01130 MIR1305-201ENST00000408300 86 ntBASIC3.51□□□□□ -1.85
LDLRP01130 RNU6-712P-201ENST00000410558 100 ntBASIC3.51□□□□□ -1.85
LDLRP01130 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.51□□□□□ -1.85
LDLRP01130 Z97055.1-201ENST00000419730 712 ntBASIC3.51□□□□□ -1.85
LDLRP01130 RPS27AP14-201ENST00000422868 454 ntBASIC3.51□□□□□ -1.85
LDLRP01130 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.51□□□□□ -1.85
LDLRP01130 ARF4P2-201ENST00000430209 526 ntBASIC3.51□□□□□ -1.85
LDLRP01130 MTND4LP10-201ENST00000435146 291 ntBASIC3.51□□□□□ -1.85
LDLRP01130 RPL37P21-201ENST00000435890 276 ntBASIC3.51□□□□□ -1.85
LDLRP01130 SETP5-201ENST00000437270 562 ntBASIC3.51□□□□□ -1.85
LDLRP01130 SNORA71B-202ENST00000439232 272 ntBASIC3.51□□□□□ -1.85
LDLRP01130 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LDLRP01130 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.51□□□□□ -1.85
LDLRP01130 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LDLRP01130 COX6CP12-201ENST00000446748 202 ntBASIC3.51□□□□□ -1.85
LDLRP01130 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.51□□□□□ -1.85
LDLRP01130 AL592447.1-201ENST00000447592 540 ntBASIC3.51□□□□□ -1.85
LDLRP01130 AC006480.1-201ENST00000449887 378 ntBASIC3.51□□□□□ -1.85
LDLRP01130 FGF7P6-202ENST00000451282 293 ntBASIC3.51□□□□□ -1.85
LDLRP01130 MRPS31P2-201ENST00000451581 518 ntBASIC3.51□□□□□ -1.85
LDLRP01130 CYCSP35-201ENST00000451978 304 ntBASIC3.51□□□□□ -1.85
LDLRP01130 AL359385.1-201ENST00000456509 365 ntBASIC3.51□□□□□ -1.85
LDLRP01130 AL133162.1-201ENST00000463228 453 ntBASIC3.51□□□□□ -1.85
LDLRP01130 RPS4XP13-201ENST00000483219 789 ntBASIC3.51□□□□□ -1.85
LDLRP01130 AC021678.1-201ENST00000505195 936 ntBASIC3.51□□□□□ -1.85
LDLRP01130 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.51□□□□□ -1.85
LDLRP01130 AC109464.2-201ENST00000510242 943 ntBASIC3.51□□□□□ -1.85
LDLRP01130 RNU6-714P-201ENST00000516963 103 ntBASIC3.51□□□□□ -1.85
LDLRP01130 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.51□□□□□ -1.85
LDLRP01130 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LDLRP01130 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.51□□□□□ -1.85
LDLRP01130 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.51□□□□□ -1.85
LDLRP01130 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.51□□□□□ -1.85
LDLRP01130 TGIF1P1-201ENST00000558095 802 ntBASIC3.51□□□□□ -1.85
LDLRP01130 TPRKBP2-201ENST00000565969 475 ntBASIC3.51□□□□□ -1.85
LDLRP01130 AC034268.2-201ENST00000571784 482 ntBASIC3.51□□□□□ -1.85
LDLRP01130 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.51□□□□□ -1.85
LDLRP01130 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.51□□□□□ -1.85
LDLRP01130 AL353997.4-201ENST00000586196 166 ntBASIC3.51□□□□□ -1.85
LDLRP01130 XIAPP1-201ENST00000603162 600 ntBASIC3.51□□□□□ -1.85
LDLRP01130 AC012669.1-201ENST00000603209 283 ntBASIC3.51□□□□□ -1.85
LDLRP01130 AF250324.2-201ENST00000608299 610 ntBASIC3.51□□□□□ -1.85
LDLRP01130 AL590099.1-201ENST00000615276 138 ntBASIC3.51□□□□□ -1.85
LDLRP01130 AC027807.2-201ENST00000616099 408 ntBASIC3.51□□□□□ -1.85
LDLRP01130 SCARNA15.3-201ENST00000626315 122 ntBASIC3.51□□□□□ -1.85
LDLRP01130 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.51□□□□□ -1.85
LDLRP01130 SCARNA4.1-201ENST00000628597 123 ntBASIC3.51□□□□□ -1.85
LDLRP01130 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.51□□□□□ -1.85
LDLRP01130 AC099654.12-201ENST00000639868 649 ntBASIC3.51□□□□□ -1.85
LDLRP01130 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.51□□□□□ -1.85
LDLRP01130 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LDLRP01130 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.51□□□□□ -1.85
LDLRP01130 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.5□□□□□ -1.85
LDLRP01130 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.5□□□□□ -1.85
LDLRP01130 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
LDLRP01130 RNY4P24-201ENST00000362735 96 ntBASIC3.5□□□□□ -1.85
LDLRP01130 RNU6-97P-201ENST00000363387 104 ntBASIC3.5□□□□□ -1.85
LDLRP01130 RNU6-629P-201ENST00000384061 103 ntBASIC3.5□□□□□ -1.85
LDLRP01130 RNU6-769P-201ENST00000384407 104 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AC096664.2-201ENST00000411843 406 ntBASIC3.5□□□□□ -1.85
LDLRP01130 RPS7P15-201ENST00000415804 584 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.5□□□□□ -1.85
LDLRP01130 AL591419.1-201ENST00000427423 339 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.5□□□□□ -1.85
LDLRP01130 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.5□□□□□ -1.85
LDLRP01130 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.5□□□□□ -1.85
LDLRP01130 AL158071.1-201ENST00000430315 461 ntBASIC3.5□□□□□ -1.85
LDLRP01130 EZH2P1-201ENST00000431167 291 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.5□□□□□ -1.85
LDLRP01130 NDUFB1P1-201ENST00000435191 180 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AC091862.1-201ENST00000438016 1100 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.5□□□□□ -1.85
LDLRP01130 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.5□□□□□ -1.85
LDLRP01130 AC006539.3-201ENST00000454258 129 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.5□□□□□ -1.85
LDLRP01130 snoU109.4-201ENST00000458953 143 ntBASIC3.5□□□□□ -1.85
LDLRP01130 RPL23AP55-201ENST00000498163 452 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.5□□□□□ -1.85
LDLRP01130 ARL2BPP4-201ENST00000506854 471 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.5□□□□□ -1.85
LDLRP01130 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LDLRP01130 RNU1-103P-201ENST00000516502 125 ntBASIC3.5□□□□□ -1.85
LDLRP01130 RN7SKP244-201ENST00000516513 307 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AC025881.1-201ENST00000518851 512 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AC007991.1-201ENST00000522680 631 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AP003392.2-201ENST00000527269 208 ntBASIC3.5□□□□□ -1.85
LDLRP01130 RPS3AP4-201ENST00000555161 764 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.5□□□□□ -1.85
LDLRP01130 AC006960.3-201ENST00000561845 705 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AC091489.2-201ENST00000566263 604 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AC092325.1-201ENST00000566449 554 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.5□□□□□ -1.85
LDLRP01130 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms