Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
ALDH1A1P00352 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.9□□□□□ -1.46
ALDH1A1P00352 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
ALDH1A1P00352 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.9□□□□□ -1.46
ALDH1A1P00352 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
ALDH1A1P00352 SAMMSON-226ENST00000642089 1582 ntBASIC5.9□□□□□ -1.46
ALDH1A1P00352 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
ALDH1A1P00352 RNU6-45P-201ENST00000384471 107 ntBASIC5.9□□□□□ -1.46
ALDH1A1P00352 SNORD20-201ENST00000384550 80 ntBASIC5.9□□□□□ -1.46
ALDH1A1P00352 RNU2-15P-201ENST00000410692 191 ntBASIC5.9□□□□□ -1.46
ALDH1A1P00352 AC017079.2-201ENST00000416102 485 ntBASIC5.9□□□□□ -1.46
ALDH1A1P00352 BX510359.2-201ENST00000417920 305 ntBASIC5.9□□□□□ -1.46
ALDH1A1P00352 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.9□□□□□ -1.46
ALDH1A1P00352 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.9□□□□□ -1.46
ALDH1A1P00352 AC005912.1-201ENST00000495392 255 ntBASIC5.9□□□□□ -1.46
ALDH1A1P00352 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.9□□□□□ -1.46
ALDH1A1P00352 AC074250.1-201ENST00000511117 192 ntBASIC5.9□□□□□ -1.46
ALDH1A1P00352 AC005798.1-201ENST00000513715 387 ntBASIC5.9□□□□□ -1.46
ALDH1A1P00352 DEFB108D-201ENST00000527787 222 ntBASIC5.9□□□□□ -1.46
ALDH1A1P00352 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.9□□□□□ -1.46
ALDH1A1P00352 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.9□□□□□ -1.46
ALDH1A1P00352 MIR4715-201ENST00000584117 79 ntBASIC5.9□□□□□ -1.46
ALDH1A1P00352 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.9□□□□□ -1.46
ALDH1A1P00352 AC018628.1-201ENST00000624147 3819 ntBASIC5.9□□□□□ -1.46
ALDH1A1P00352 AC068724.3-201ENST00000625906 87 ntBASIC5.9□□□□□ -1.46
ALDH1A1P00352 AL596275.2-204ENST00000641628 552 ntBASIC5.9□□□□□ -1.46
ALDH1A1P00352 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
ALDH1A1P00352 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.9□□□□□ -1.47
ALDH1A1P00352 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ALDH1A1P00352 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.9□□□□□ -1.47
ALDH1A1P00352 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ALDH1A1P00352 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.9□□□□□ -1.47
ALDH1A1P00352 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ALDH1A1P00352 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.89□□□□□ -1.47
ALDH1A1P00352 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ALDH1A1P00352 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ALDH1A1P00352 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ALDH1A1P00352 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ALDH1A1P00352 RNA5SP191-201ENST00000362585 102 ntBASIC5.89□□□□□ -1.47
ALDH1A1P00352 Y_RNA.439-201ENST00000384119 94 ntBASIC5.89□□□□□ -1.47
ALDH1A1P00352 Y_RNA.480-201ENST00000384364 102 ntBASIC5.89□□□□□ -1.47
ALDH1A1P00352 Y_RNA.533-201ENST00000384596 114 ntBASIC5.89□□□□□ -1.47
ALDH1A1P00352 RNU6-417P-201ENST00000384712 107 ntBASIC5.89□□□□□ -1.47
ALDH1A1P00352 SNORD73A-201ENST00000386062 65 ntBASIC5.89□□□□□ -1.47
ALDH1A1P00352 SNORA53-201ENST00000391141 249 ntBASIC5.89□□□□□ -1.47
ALDH1A1P00352 AC069218.2-201ENST00000411665 344 ntBASIC5.89□□□□□ -1.47
ALDH1A1P00352 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ALDH1A1P00352 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.89□□□□□ -1.47
ALDH1A1P00352 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.89□□□□□ -1.47
ALDH1A1P00352 GAPDHP27-201ENST00000447427 1020 ntBASIC5.89□□□□□ -1.47
ALDH1A1P00352 AC008264.1-201ENST00000447612 367 ntBASIC5.89□□□□□ -1.47
ALDH1A1P00352 AC087477.1-201ENST00000465747 340 ntBASIC5.89□□□□□ -1.47
ALDH1A1P00352 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.89□□□□□ -1.47
ALDH1A1P00352 RPL31P60-201ENST00000478450 367 ntBASIC5.89□□□□□ -1.47
ALDH1A1P00352 AC022133.1-201ENST00000490961 571 ntBASIC5.89□□□□□ -1.47
ALDH1A1P00352 AC010469.2-201ENST00000496412 480 ntBASIC5.89□□□□□ -1.47
ALDH1A1P00352 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.89□□□□□ -1.47
ALDH1A1P00352 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.89□□□□□ -1.47
ALDH1A1P00352 MRPS18CP4-201ENST00000535821 231 ntBASIC5.89□□□□□ -1.47
ALDH1A1P00352 AC011921.3-201ENST00000605540 361 ntBASIC5.89□□□□□ -1.47
ALDH1A1P00352 AC104465.1-201ENST00000611365 139 ntBASIC5.89□□□□□ -1.47
ALDH1A1P00352 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ALDH1A1P00352 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.89□□□□□ -1.47
ALDH1A1P00352 HAUS6P2-201ENST00000433254 2404 ntBASIC5.89□□□□□ -1.47
ALDH1A1P00352 EOGT-210ENST00000615922 1931 ntBASIC5.89□□□□□ -1.47
ALDH1A1P00352 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ALDH1A1P00352 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.89□□□□□ -1.47
ALDH1A1P00352 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ALDH1A1P00352 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ALDH1A1P00352 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.89□□□□□ -1.47
ALDH1A1P00352 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ALDH1A1P00352 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
ALDH1A1P00352 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ALDH1A1P00352 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
ALDH1A1P00352 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ALDH1A1P00352 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ALDH1A1P00352 AC099654.2-201ENST00000433031 1980 ntBASIC5.88□□□□□ -1.47
ALDH1A1P00352 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ALDH1A1P00352 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.88□□□□□ -1.47
ALDH1A1P00352 RNU1-74P-201ENST00000384108 171 ntBASIC5.88□□□□□ -1.47
ALDH1A1P00352 RNU6-754P-201ENST00000391166 107 ntBASIC5.88□□□□□ -1.47
ALDH1A1P00352 AC234779.1-201ENST00000425910 285 ntBASIC5.88□□□□□ -1.47
ALDH1A1P00352 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.88□□□□□ -1.47
ALDH1A1P00352 NUTF2P7-201ENST00000453086 375 ntBASIC5.88□□□□□ -1.47
ALDH1A1P00352 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
ALDH1A1P00352 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.88□□□□□ -1.47
ALDH1A1P00352 RN7SKP276-201ENST00000516242 268 ntBASIC5.88□□□□□ -1.47
ALDH1A1P00352 AC010186.2-204ENST00000537668 439 ntBASIC5.88□□□□□ -1.47
ALDH1A1P00352 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.88□□□□□ -1.47
ALDH1A1P00352 AC093023.1-201ENST00000547375 507 ntBASIC5.88□□□□□ -1.47
ALDH1A1P00352 CPDP1-201ENST00000579660 283 ntBASIC5.88□□□□□ -1.47
ALDH1A1P00352 AL356218.2-201ENST00000605264 187 ntBASIC5.88□□□□□ -1.47
ALDH1A1P00352 AL121917.1-203ENST00000605534 577 ntBASIC5.88□□□□□ -1.47
ALDH1A1P00352 RNU6-85P-201ENST00000605989 107 ntBASIC5.88□□□□□ -1.47
ALDH1A1P00352 AC244107.2-201ENST00000611773 76 ntBASIC5.88□□□□□ -1.47
ALDH1A1P00352 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.88□□□□□ -1.47
ALDH1A1P00352 SNHG22-203ENST00000617833 660 ntBASIC5.88□□□□□ -1.47
ALDH1A1P00352 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ALDH1A1P00352 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
ALDH1A1P00352 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms