Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 RNU4-92P-201ENST00000363783 136 ntBASIC2.92□□□□□ -1.94
MBD3O95983 RNU1-112P-201ENST00000364401 164 ntBASIC2.92□□□□□ -1.94
MBD3O95983 Y_RNA.234-201ENST00000364409 97 ntBASIC2.92□□□□□ -1.94
MBD3O95983 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.92□□□□□ -1.94
MBD3O95983 AL645937.1-202ENST00000421799 937 ntBASIC2.92□□□□□ -1.94
MBD3O95983 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.92□□□□□ -1.94
MBD3O95983 AL139421.1-201ENST00000423010 169 ntBASIC2.92□□□□□ -1.94
MBD3O95983 AL953862.1-201ENST00000423016 168 ntBASIC2.92□□□□□ -1.94
MBD3O95983 PPP1R11P2-201ENST00000423543 382 ntBASIC2.92□□□□□ -1.94
MBD3O95983 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.92□□□□□ -1.94
MBD3O95983 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.92□□□□□ -1.94
MBD3O95983 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.92□□□□□ -1.94
MBD3O95983 VN1R34P-201ENST00000447387 883 ntBASIC2.92□□□□□ -1.94
MBD3O95983 AC234775.1-201ENST00000454247 670 ntBASIC2.92□□□□□ -1.94
MBD3O95983 SNORA84-201ENST00000459229 133 ntBASIC2.92□□□□□ -1.94
MBD3O95983 AC104563.1-201ENST00000476147 376 ntBASIC2.92□□□□□ -1.94
MBD3O95983 FAM172BP-201ENST00000487497 1089 ntBASIC2.92□□□□□ -1.94
MBD3O95983 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.92□□□□□ -1.94
MBD3O95983 MTND3P3-201ENST00000505004 126 ntBASIC2.92□□□□□ -1.94
MBD3O95983 RNU6-714P-201ENST00000516963 103 ntBASIC2.92□□□□□ -1.94
MBD3O95983 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
MBD3O95983 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.92□□□□□ -1.94
MBD3O95983 AC009712.1-201ENST00000564938 316 ntBASIC2.92□□□□□ -1.94
MBD3O95983 MIR3158-1-201ENST00000583596 81 ntBASIC2.92□□□□□ -1.94
MBD3O95983 AL645944.1-201ENST00000603857 493 ntBASIC2.92□□□□□ -1.94
MBD3O95983 AC107075.1-201ENST00000613695 314 ntBASIC2.92□□□□□ -1.94
MBD3O95983 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
MBD3O95983 AC010680.1-201ENST00000590024 3590 ntBASIC2.92□□□□□ -1.94
MBD3O95983 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
MBD3O95983 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.91□□□□□ -1.94
MBD3O95983 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
MBD3O95983 RNA5SP374-201ENST00000362939 125 ntBASIC2.91□□□□□ -1.94
MBD3O95983 SNORA38.1-201ENST00000364172 131 ntBASIC2.91□□□□□ -1.94
MBD3O95983 RNU6-343P-201ENST00000364709 104 ntBASIC2.91□□□□□ -1.94
MBD3O95983 SNORA18.3-201ENST00000384122 132 ntBASIC2.91□□□□□ -1.94
MBD3O95983 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
MBD3O95983 ATP5F1P3-201ENST00000397213 657 ntBASIC2.91□□□□□ -1.94
MBD3O95983 MIR1284-201ENST00000408337 120 ntBASIC2.91□□□□□ -1.94
MBD3O95983 RPL19P1-201ENST00000411635 428 ntBASIC2.91□□□□□ -1.94
MBD3O95983 HMGN2P35-201ENST00000412164 270 ntBASIC2.91□□□□□ -1.94
MBD3O95983 EEF1A1P41-201ENST00000414667 207 ntBASIC2.91□□□□□ -1.94
MBD3O95983 ATG3P1-201ENST00000419507 911 ntBASIC2.91□□□□□ -1.94
MBD3O95983 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.91□□□□□ -1.94
MBD3O95983 MTCO2P17-201ENST00000424336 677 ntBASIC2.91□□□□□ -1.94
MBD3O95983 AC129850.1-201ENST00000436203 508 ntBASIC2.91□□□□□ -1.94
MBD3O95983 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.91□□□□□ -1.94
MBD3O95983 MTND5P14-201ENST00000441481 1267 ntBASIC2.91□□□□□ -1.94
MBD3O95983 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.91□□□□□ -1.94
MBD3O95983 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.91□□□□□ -1.94
MBD3O95983 RPL31P60-201ENST00000478450 367 ntBASIC2.91□□□□□ -1.94
MBD3O95983 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.91□□□□□ -1.94
MBD3O95983 DSTNP2-201ENST00000504533 515 ntBASIC2.91□□□□□ -1.94
MBD3O95983 AC010374.2-201ENST00000512933 535 ntBASIC2.91□□□□□ -1.94
MBD3O95983 RNY4P37-201ENST00000516225 96 ntBASIC2.91□□□□□ -1.94
MBD3O95983 SNORA67.7-201ENST00000516664 135 ntBASIC2.91□□□□□ -1.94
MBD3O95983 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.91□□□□□ -1.94
MBD3O95983 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.91□□□□□ -1.94
MBD3O95983 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.91□□□□□ -1.94
MBD3O95983 OR6C7P-201ENST00000547875 934 ntBASIC2.91□□□□□ -1.94
MBD3O95983 CCNG2P1-201ENST00000549521 1000 ntBASIC2.91□□□□□ -1.94
MBD3O95983 MTCYBP23-201ENST00000558717 1102 ntBASIC2.91□□□□□ -1.94
MBD3O95983 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.91□□□□□ -1.94
MBD3O95983 AC091057.3-201ENST00000602684 733 ntBASIC2.91□□□□□ -1.94
MBD3O95983 AC068313.1-201ENST00000604028 1008 ntBASIC2.91□□□□□ -1.94
MBD3O95983 AL391834.2-201ENST00000609982 546 ntBASIC2.91□□□□□ -1.94
MBD3O95983 AC006133.1-201ENST00000617106 264 ntBASIC2.91□□□□□ -1.94
MBD3O95983 AC099654.9-201ENST00000637055 678 ntBASIC2.91□□□□□ -1.94
MBD3O95983 MTCO1P9-201ENST00000505577 1534 ntBASIC2.91□□□□□ -1.94
MBD3O95983 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
MBD3O95983 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.9□□□□□ -1.94
MBD3O95983 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
MBD3O95983 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
MBD3O95983 RNU4-68P-201ENST00000364314 141 ntBASIC2.9□□□□□ -1.95
MBD3O95983 Y_RNA.465-201ENST00000384293 102 ntBASIC2.9□□□□□ -1.95
MBD3O95983 RPL23AP29-201ENST00000397284 453 ntBASIC2.9□□□□□ -1.95
MBD3O95983 MIR1289-1-201ENST00000408836 144 ntBASIC2.9□□□□□ -1.95
MBD3O95983 RNU4-22P-201ENST00000411058 166 ntBASIC2.9□□□□□ -1.95
MBD3O95983 MTCYBP38-201ENST00000417160 1123 ntBASIC2.9□□□□□ -1.95
MBD3O95983 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.9□□□□□ -1.95
MBD3O95983 TAAR7P-201ENST00000436141 242 ntBASIC2.9□□□□□ -1.95
MBD3O95983 THAP5P1-201ENST00000439089 262 ntBASIC2.9□□□□□ -1.95
MBD3O95983 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.9□□□□□ -1.95
MBD3O95983 EXOSC3P1-201ENST00000448649 500 ntBASIC2.9□□□□□ -1.95
MBD3O95983 SNRPGP6-201ENST00000451124 220 ntBASIC2.9□□□□□ -1.95
MBD3O95983 RPL21P134-201ENST00000453468 483 ntBASIC2.9□□□□□ -1.95
MBD3O95983 BX322784.1-201ENST00000455793 1077 ntBASIC2.9□□□□□ -1.95
MBD3O95983 RNU6-420P-201ENST00000458780 107 ntBASIC2.9□□□□□ -1.95
MBD3O95983 MTND1P16-201ENST00000465177 898 ntBASIC2.9□□□□□ -1.95
MBD3O95983 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.9□□□□□ -1.95
MBD3O95983 AC134050.1-201ENST00000495088 933 ntBASIC2.9□□□□□ -1.95
MBD3O95983 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.9□□□□□ -1.95
MBD3O95983 AC119751.4-201ENST00000507498 357 ntBASIC2.9□□□□□ -1.95
MBD3O95983 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
MBD3O95983 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.9□□□□□ -1.95
MBD3O95983 SNORA31.11-201ENST00000516528 139 ntBASIC2.9□□□□□ -1.95
MBD3O95983 RNU6-1282P-201ENST00000516735 96 ntBASIC2.9□□□□□ -1.95
MBD3O95983 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.9□□□□□ -1.95
MBD3O95983 CASP1P1-201ENST00000526345 212 ntBASIC2.9□□□□□ -1.95
MBD3O95983 AC087241.2-201ENST00000535801 324 ntBASIC2.9□□□□□ -1.95
MBD3O95983 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms