Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AL159987.2-201ENST00000432754 307 ntBASIC3.71□□□□□ -1.82
RTN3O95197 NEK4P1-201ENST00000433383 879 ntBASIC3.71□□□□□ -1.82
RTN3O95197 SNRPEP4-201ENST00000435815 279 ntBASIC3.71□□□□□ -1.82
RTN3O95197 NDUFB4P6-201ENST00000436819 366 ntBASIC3.71□□□□□ -1.82
RTN3O95197 UBE2D3P4-201ENST00000441973 436 ntBASIC3.71□□□□□ -1.82
RTN3O95197 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.71□□□□□ -1.82
RTN3O95197 RPL7P49-201ENST00000471402 708 ntBASIC3.71□□□□□ -1.82
RTN3O95197 RPL31P60-201ENST00000478450 367 ntBASIC3.71□□□□□ -1.82
RTN3O95197 AL049874.1-201ENST00000489560 388 ntBASIC3.71□□□□□ -1.82
RTN3O95197 RPS15AP36-201ENST00000492022 382 ntBASIC3.71□□□□□ -1.82
RTN3O95197 AC010486.3-201ENST00000511602 785 ntBASIC3.71□□□□□ -1.82
RTN3O95197 AF131216.2-201ENST00000512316 564 ntBASIC3.71□□□□□ -1.82
RTN3O95197 RNU2-27P-201ENST00000516185 142 ntBASIC3.71□□□□□ -1.82
RTN3O95197 AC087373.1-201ENST00000524920 491 ntBASIC3.71□□□□□ -1.82
RTN3O95197 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.71□□□□□ -1.82
RTN3O95197 AC011602.1-201ENST00000546484 331 ntBASIC3.71□□□□□ -1.82
RTN3O95197 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.71□□□□□ -1.82
RTN3O95197 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.71□□□□□ -1.82
RTN3O95197 OR4H12P-201ENST00000556269 907 ntBASIC3.71□□□□□ -1.82
RTN3O95197 Z99497.2-201ENST00000603634 310 ntBASIC3.71□□□□□ -1.82
RTN3O95197 AC009570.1-201ENST00000609599 745 ntBASIC3.71□□□□□ -1.82
RTN3O95197 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.71□□□□□ -1.82
RTN3O95197 AC002076.2-201ENST00000617362 122 ntBASIC3.71□□□□□ -1.82
RTN3O95197 U4.6-201ENST00000621618 127 ntBASIC3.71□□□□□ -1.82
RTN3O95197 ZNF833P-201ENST00000424938 1494 ntBASIC3.71□□□□□ -1.82
RTN3O95197 AC007256.1-201ENST00000392253 2765 ntBASIC3.71□□□□□ -1.82
RTN3O95197 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RTN3O95197 AC007656.2-201ENST00000624902 4547 ntBASIC3.71□□□□□ -1.82
RTN3O95197 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RTN3O95197 AL513302.2-201ENST00000562313 1842 ntBASIC3.7□□□□□ -1.82
RTN3O95197 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
RTN3O95197 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.7□□□□□ -1.82
RTN3O95197 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RTN3O95197 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.7□□□□□ -1.82
RTN3O95197 RNU5A-8P-201ENST00000364102 114 ntBASIC3.7□□□□□ -1.82
RTN3O95197 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RTN3O95197 MT-TH-201ENST00000387441 69 ntBASIC3.7□□□□□ -1.82
RTN3O95197 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.7□□□□□ -1.82
RTN3O95197 TXNP7-201ENST00000406296 293 ntBASIC3.7□□□□□ -1.82
RTN3O95197 FAT1P1-201ENST00000406588 507 ntBASIC3.7□□□□□ -1.82
RTN3O95197 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RTN3O95197 AC068533.1-201ENST00000418542 415 ntBASIC3.7□□□□□ -1.82
RTN3O95197 DBIP2-201ENST00000419076 262 ntBASIC3.7□□□□□ -1.82
RTN3O95197 NDUFB4P7-201ENST00000423198 363 ntBASIC3.7□□□□□ -1.82
RTN3O95197 TMEM167AP1-201ENST00000423409 219 ntBASIC3.7□□□□□ -1.82
RTN3O95197 AC012498.1-201ENST00000424037 437 ntBASIC3.7□□□□□ -1.82
RTN3O95197 AL353777.1-201ENST00000425552 326 ntBASIC3.7□□□□□ -1.82
RTN3O95197 AL590383.1-201ENST00000428602 75 ntBASIC3.7□□□□□ -1.82
RTN3O95197 MTCO3P45-201ENST00000443036 613 ntBASIC3.7□□□□□ -1.82
RTN3O95197 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.7□□□□□ -1.82
RTN3O95197 MTND2P24-201ENST00000453434 806 ntBASIC3.7□□□□□ -1.82
RTN3O95197 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.7□□□□□ -1.82
RTN3O95197 AL359385.1-201ENST00000456509 365 ntBASIC3.7□□□□□ -1.82
RTN3O95197 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.7□□□□□ -1.82
RTN3O95197 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.7□□□□□ -1.82
RTN3O95197 RNA5SP310-201ENST00000459084 116 ntBASIC3.7□□□□□ -1.82
RTN3O95197 AC092754.2-201ENST00000463506 460 ntBASIC3.7□□□□□ -1.82
RTN3O95197 RN7SL594P-201ENST00000470590 287 ntBASIC3.7□□□□□ -1.82
RTN3O95197 RN7SL442P-201ENST00000473804 320 ntBASIC3.7□□□□□ -1.82
RTN3O95197 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.7□□□□□ -1.82
RTN3O95197 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.7□□□□□ -1.82
RTN3O95197 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.7□□□□□ -1.82
RTN3O95197 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.7□□□□□ -1.82
RTN3O95197 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.7□□□□□ -1.82
RTN3O95197 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.7□□□□□ -1.82
RTN3O95197 AL356432.3-201ENST00000568952 465 ntBASIC3.7□□□□□ -1.82
RTN3O95197 AL031775.1-201ENST00000607014 887 ntBASIC3.7□□□□□ -1.82
RTN3O95197 AC013476.2-201ENST00000614456 459 ntBASIC3.7□□□□□ -1.82
RTN3O95197 AC027807.2-201ENST00000616099 408 ntBASIC3.7□□□□□ -1.82
RTN3O95197 AL355365.1-201ENST00000616480 294 ntBASIC3.7□□□□□ -1.82
RTN3O95197 MIR7975-201ENST00000619350 68 ntBASIC3.7□□□□□ -1.82
RTN3O95197 AC022079.1-201ENST00000621546 602 ntBASIC3.7□□□□□ -1.82
RTN3O95197 PLCE1P1-201ENST00000622094 305 ntBASIC3.7□□□□□ -1.82
RTN3O95197 MIR3974-201ENST00000637126 96 ntBASIC3.7□□□□□ -1.82
RTN3O95197 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.69□□□□□ -1.82
RTN3O95197 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.69□□□□□ -1.82
RTN3O95197 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RTN3O95197 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
RTN3O95197 RPL7P26-201ENST00000333817 754 ntBASIC3.69□□□□□ -1.82
RTN3O95197 FRG1CP-201ENST00000358464 769 ntBASIC3.69□□□□□ -1.82
RTN3O95197 RNA5SP42-201ENST00000364278 115 ntBASIC3.69□□□□□ -1.82
RTN3O95197 MIR34B-201ENST00000385076 84 ntBASIC3.69□□□□□ -1.82
RTN3O95197 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RTN3O95197 SNORD115.1-201ENST00000391109 76 ntBASIC3.69□□□□□ -1.82
RTN3O95197 SNORA48.8-201ENST00000391324 134 ntBASIC3.69□□□□□ -1.82
RTN3O95197 AC110754.1-201ENST00000399740 601 ntBASIC3.69□□□□□ -1.82
RTN3O95197 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.69□□□□□ -1.82
RTN3O95197 AL390023.1-201ENST00000428836 262 ntBASIC3.69□□□□□ -1.82
RTN3O95197 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTN3O95197 ELOCP30-201ENST00000447108 299 ntBASIC3.69□□□□□ -1.82
RTN3O95197 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.69□□□□□ -1.82
RTN3O95197 AC108059.3-201ENST00000456388 214 ntBASIC3.69□□□□□ -1.82
RTN3O95197 U3.44-201ENST00000458938 192 ntBASIC3.69□□□□□ -1.82
RTN3O95197 AC010401.1-201ENST00000463867 348 ntBASIC3.69□□□□□ -1.82
RTN3O95197 RPS4XP22-201ENST00000480755 780 ntBASIC3.69□□□□□ -1.82
RTN3O95197 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RTN3O95197 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.69□□□□□ -1.82
RTN3O95197 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.69□□□□□ -1.82
RTN3O95197 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.69□□□□□ -1.82
RTN3O95197 SCARNA15.2-201ENST00000516409 127 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms