Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 U8.18-201ENST00000459285 133 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 RPS20P20-201ENST00000460498 340 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 AC007537.2-201ENST00000472093 511 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.39□□□□□ -1.87
NKX2-2O95096 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.39□□□□□ -1.87
NKX2-2O95096 ARL2BPP6-201ENST00000512757 439 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 RNU6-430P-201ENST00000517078 107 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.39□□□□□ -1.87
NKX2-2O95096 AC128657.1-201ENST00000549459 145 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.39□□□□□ -1.87
NKX2-2O95096 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.39□□□□□ -1.87
NKX2-2O95096 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.39□□□□□ -1.87
NKX2-2O95096 AC025946.2-201ENST00000603398 234 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 AC245014.2-201ENST00000603689 287 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 AL161729.4-201ENST00000604650 476 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 AC246785.4-201ENST00000605374 287 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 NDUFA8P1-201ENST00000605525 367 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 AC098614.4-201ENST00000607601 462 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 AC005332.10-201ENST00000612725 619 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 AC091834.1-201ENST00000614543 472 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 AC072046.2-201ENST00000618366 268 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 AC099842.1-201ENST00000619919 596 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 AC110801.1-201ENST00000623590 212 ntBASIC3.39□□□□□ -1.87
NKX2-2O95096 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NKX2-2O95096 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.39□□□□□ -1.87
NKX2-2O95096 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
NKX2-2O95096 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NKX2-2O95096 OR4G2P-202ENST00000641004 1759 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NKX2-2O95096 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NKX2-2O95096 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NKX2-2O95096 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.38□□□□□ -1.87
NKX2-2O95096 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
NKX2-2O95096 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NKX2-2O95096 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NKX2-2O95096 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
NKX2-2O95096 HSPE1P11-201ENST00000339579 310 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 RNU4-75P-201ENST00000364621 146 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 RNU6-283P-201ENST00000364788 107 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 MIR493-201ENST00000385254 89 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NKX2-2O95096 RNU6-195P-201ENST00000411352 109 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 AC127391.1-201ENST00000411737 98 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.38□□□□□ -1.87
NKX2-2O95096 AL451054.2-201ENST00000420896 202 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 AC245054.1-201ENST00000420944 258 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 AC007283.2-201ENST00000424739 197 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 AC006989.1-201ENST00000427212 131 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 AL589823.1-201ENST00000429577 183 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 USP9YP14-201ENST00000430663 563 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 ARPC3P1-201ENST00000437218 533 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.38□□□□□ -1.87
NKX2-2O95096 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.38□□□□□ -1.87
NKX2-2O95096 SNORD97-201ENST00000459187 142 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 RBM43P1-201ENST00000476891 1081 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 AC082651.2-201ENST00000496833 166 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 AC146944.2-203ENST00000502493 354 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 UBE2CP3-201ENST00000502715 450 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 KCTD9P5-201ENST00000504141 1170 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 AC139495.1-202ENST00000513164 354 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.38□□□□□ -1.87
NKX2-2O95096 RNU2-10P-201ENST00000516375 211 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 RNU6-579P-201ENST00000516879 102 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.38□□□□□ -1.87
NKX2-2O95096 AC022616.3-201ENST00000523940 148 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.38□□□□□ -1.87
NKX2-2O95096 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NKX2-2O95096 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.38□□□□□ -1.87
NKX2-2O95096 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.38□□□□□ -1.87
NKX2-2O95096 ARL2BPP2-201ENST00000550907 489 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.38□□□□□ -1.87
NKX2-2O95096 AL121576.1-201ENST00000556055 276 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.38□□□□□ -1.87
NKX2-2O95096 MIR3167-201ENST00000579623 85 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.38□□□□□ -1.87
NKX2-2O95096 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.38□□□□□ -1.87
NKX2-2O95096 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.38□□□□□ -1.87
NKX2-2O95096 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.38□□□□□ -1.87
NKX2-2O95096 AC008498.1-201ENST00000613012 531 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 AL133173.2-201ENST00000614270 90 ntBASIC3.38□□□□□ -1.87
NKX2-2O95096 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.38□□□□□ -1.87
NKX2-2O95096 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
NKX2-2O95096 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NKX2-2O95096 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.38□□□□□ -1.87
NKX2-2O95096 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NKX2-2O95096 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NKX2-2O95096 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NKX2-2O95096 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.37□□□□□ -1.87
NKX2-2O95096 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NKX2-2O95096 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
NKX2-2O95096 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NKX2-2O95096 ZNF807-201ENST00000328088 1707 ntBASIC3.37□□□□□ -1.87
NKX2-2O95096 OR5J1P-201ENST00000313544 939 ntBASIC3.37□□□□□ -1.87
NKX2-2O95096 Y_RNA.582-201ENST00000391023 95 ntBASIC3.37□□□□□ -1.87
NKX2-2O95096 AL591034.1-201ENST00000407447 340 ntBASIC3.37□□□□□ -1.87
NKX2-2O95096 RN7SKP140-201ENST00000411196 284 ntBASIC3.37□□□□□ -1.87
NKX2-2O95096 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.37□□□□□ -1.87
NKX2-2O95096 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.37□□□□□ -1.87
NKX2-2O95096 ELOCP4-201ENST00000420090 333 ntBASIC3.37□□□□□ -1.87
NKX2-2O95096 PIGFP2-201ENST00000421400 651 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms