Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AC106028.5-201ENST00000610332 395 ntBASIC2.76□□□□□ -1.97
BRD4O60885 AL161629.2-201ENST00000615347 275 ntBASIC2.76□□□□□ -1.97
BRD4O60885 AC119674.1-220ENST00000641502 1048 ntBASIC2.76□□□□□ -1.97
BRD4O60885 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
BRD4O60885 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
BRD4O60885 RNU6-193P-201ENST00000410977 107 ntBASIC2.75□□□□□ -1.97
BRD4O60885 AC009414.1-201ENST00000427200 443 ntBASIC2.75□□□□□ -1.97
BRD4O60885 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.75□□□□□ -1.97
BRD4O60885 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.75□□□□□ -1.97
BRD4O60885 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
BRD4O60885 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.75□□□□□ -1.97
BRD4O60885 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.75□□□□□ -1.97
BRD4O60885 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.75□□□□□ -1.97
BRD4O60885 OR51B8P-201ENST00000449892 769 ntBASIC2.75□□□□□ -1.97
BRD4O60885 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.75□□□□□ -1.97
BRD4O60885 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
BRD4O60885 MRPL42P6-201ENST00000486397 371 ntBASIC2.75□□□□□ -1.97
BRD4O60885 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.75□□□□□ -1.97
BRD4O60885 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.75□□□□□ -1.97
BRD4O60885 AC104057.1-201ENST00000515547 497 ntBASIC2.75□□□□□ -1.97
BRD4O60885 RNA5SP445-201ENST00000515889 115 ntBASIC2.75□□□□□ -1.97
BRD4O60885 RNA5SP471-201ENST00000516971 106 ntBASIC2.75□□□□□ -1.97
BRD4O60885 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.75□□□□□ -1.97
BRD4O60885 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.75□□□□□ -1.97
BRD4O60885 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.75□□□□□ -1.97
BRD4O60885 AC092470.1-201ENST00000546187 132 ntBASIC2.75□□□□□ -1.97
BRD4O60885 MIR4255-201ENST00000579351 72 ntBASIC2.75□□□□□ -1.97
BRD4O60885 AC009314.1-201ENST00000603871 304 ntBASIC2.75□□□□□ -1.97
BRD4O60885 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
BRD4O60885 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
BRD4O60885 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
BRD4O60885 AC016716.1-201ENST00000265882 708 ntBASIC2.74□□□□□ -1.97
BRD4O60885 Y_RNA.40-201ENST00000362645 93 ntBASIC2.74□□□□□ -1.97
BRD4O60885 RNY1P10-201ENST00000363268 113 ntBASIC2.74□□□□□ -1.97
BRD4O60885 SNORA17.3-201ENST00000391159 129 ntBASIC2.74□□□□□ -1.97
BRD4O60885 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.74□□□□□ -1.97
BRD4O60885 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
BRD4O60885 OR4K11P-201ENST00000431829 904 ntBASIC2.74□□□□□ -1.97
BRD4O60885 MTCO1P57-201ENST00000432182 261 ntBASIC2.74□□□□□ -1.97
BRD4O60885 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.74□□□□□ -1.97
BRD4O60885 RPL36AP21-201ENST00000490372 323 ntBASIC2.74□□□□□ -1.97
BRD4O60885 AC025768.1-201ENST00000510057 267 ntBASIC2.74□□□□□ -1.97
BRD4O60885 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.74□□□□□ -1.97
BRD4O60885 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.74□□□□□ -1.97
BRD4O60885 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.74□□□□□ -1.97
BRD4O60885 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
BRD4O60885 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
BRD4O60885 AP005901.5-201ENST00000545779 1796 ntBASIC2.74□□□□□ -1.97
BRD4O60885 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
BRD4O60885 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
BRD4O60885 MTND1P23-201ENST00000416931 372 ntBASIC2.74□□□□□ -1.97
BRD4O60885 AC099677.1-201ENST00000420575 175 ntBASIC2.74□□□□□ -1.97
BRD4O60885 RPL36P19-201ENST00000430744 301 ntBASIC2.74□□□□□ -1.97
BRD4O60885 NDUFB4P6-201ENST00000436819 366 ntBASIC2.74□□□□□ -1.97
BRD4O60885 RPS15AP7-201ENST00000439294 405 ntBASIC2.74□□□□□ -1.97
BRD4O60885 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.74□□□□□ -1.97
BRD4O60885 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.74□□□□□ -1.97
BRD4O60885 AC113155.1-201ENST00000511141 769 ntBASIC2.74□□□□□ -1.97
BRD4O60885 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.74□□□□□ -1.97
BRD4O60885 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.74□□□□□ -1.97
BRD4O60885 AP000790.1-201ENST00000528891 737 ntBASIC2.74□□□□□ -1.97
BRD4O60885 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.74□□□□□ -1.97
BRD4O60885 MYL12BP1-201ENST00000569826 507 ntBASIC2.74□□□□□ -1.97
BRD4O60885 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.74□□□□□ -1.97
BRD4O60885 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
BRD4O60885 MIR337-201ENST00000362281 93 ntBASIC2.73□□□□□ -1.97
BRD4O60885 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.73□□□□□ -1.97
BRD4O60885 MIR524-201ENST00000385242 87 ntBASIC2.73□□□□□ -1.97
BRD4O60885 RNA5SP354-201ENST00000391247 136 ntBASIC2.73□□□□□ -1.97
BRD4O60885 NPM1P10-201ENST00000398310 865 ntBASIC2.73□□□□□ -1.97
BRD4O60885 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.73□□□□□ -1.97
BRD4O60885 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.73□□□□□ -1.97
BRD4O60885 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.73□□□□□ -1.97
BRD4O60885 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.73□□□□□ -1.97
BRD4O60885 FABP5P13-201ENST00000452144 328 ntBASIC2.73□□□□□ -1.97
BRD4O60885 RNU6-775P-201ENST00000459318 96 ntBASIC2.73□□□□□ -1.97
BRD4O60885 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.73□□□□□ -1.97
BRD4O60885 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.73□□□□□ -1.97
BRD4O60885 AC008885.2-201ENST00000509506 930 ntBASIC2.73□□□□□ -1.97
BRD4O60885 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.73□□□□□ -1.97
BRD4O60885 IGLV3-17-201ENST00000519099 244 ntBASIC2.73□□□□□ -1.97
BRD4O60885 SUB1P1-201ENST00000524415 382 ntBASIC2.73□□□□□ -1.97
BRD4O60885 C1DP5-201ENST00000525775 383 ntBASIC2.73□□□□□ -1.97
BRD4O60885 OR4R1P-201ENST00000529879 463 ntBASIC2.73□□□□□ -1.97
BRD4O60885 AC121758.2-201ENST00000553271 193 ntBASIC2.73□□□□□ -1.97
BRD4O60885 AC110588.1-201ENST00000559699 137 ntBASIC2.73□□□□□ -1.97
BRD4O60885 AC092954.1-201ENST00000609121 445 ntBASIC2.73□□□□□ -1.97
BRD4O60885 MIR8070-201ENST00000616510 88 ntBASIC2.73□□□□□ -1.97
BRD4O60885 AC005539.1-201ENST00000443768 1479 ntBASIC2.73□□□□□ -1.97
BRD4O60885 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
BRD4O60885 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
BRD4O60885 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
BRD4O60885 SET-203ENST00000372688 801 ntTSL 2 BASIC2.72□□□□□ -1.97
BRD4O60885 MIR499A-201ENST00000384903 122 ntBASIC2.72□□□□□ -1.97
BRD4O60885 HMGB3P2-201ENST00000411913 584 ntBASIC2.72□□□□□ -1.97
BRD4O60885 LUZP4P1-201ENST00000415420 344 ntBASIC2.72□□□□□ -1.97
BRD4O60885 Z82205.1-201ENST00000428456 297 ntBASIC2.72□□□□□ -1.97
BRD4O60885 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.72□□□□□ -1.97
BRD4O60885 AC233279.1-201ENST00000455300 423 ntBASIC2.72□□□□□ -1.97
BRD4O60885 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms