Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RN7SKP31-201ENST00000516354 278 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 AC239860.2-201ENST00000525886 270 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.38□□□□□ -1.87
CACNA1FO60840 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CACNA1FO60840 AC087481.2-201ENST00000565492 330 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.38□□□□□ -1.87
CACNA1FO60840 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.38□□□□□ -1.87
CACNA1FO60840 NF1P5-201ENST00000588287 448 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 WISP1-OT1-201ENST00000602893 642 ntBASIC3.38□□□□□ -1.87
CACNA1FO60840 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.38□□□□□ -1.87
CACNA1FO60840 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CACNA1FO60840 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CACNA1FO60840 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CACNA1FO60840 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.37□□□□□ -1.87
CACNA1FO60840 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CACNA1FO60840 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CACNA1FO60840 NPM1P11-201ENST00000417106 855 ntBASIC3.37□□□□□ -1.87
CACNA1FO60840 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.37□□□□□ -1.87
CACNA1FO60840 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.37□□□□□ -1.87
CACNA1FO60840 TPTE2P6-202ENST00000445572 1007 ntBASIC3.37□□□□□ -1.87
CACNA1FO60840 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.37□□□□□ -1.87
CACNA1FO60840 AL034418.1-201ENST00000448675 860 ntBASIC3.37□□□□□ -1.87
CACNA1FO60840 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.37□□□□□ -1.87
CACNA1FO60840 SNORD108-201ENST00000459332 71 ntBASIC3.37□□□□□ -1.87
CACNA1FO60840 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.37□□□□□ -1.87
CACNA1FO60840 AC100870.1-201ENST00000522035 505 ntBASIC3.37□□□□□ -1.87
CACNA1FO60840 AC234778.2-201ENST00000566241 354 ntBASIC3.37□□□□□ -1.87
CACNA1FO60840 ISCA1P3-201ENST00000577104 373 ntBASIC3.37□□□□□ -1.87
CACNA1FO60840 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.37□□□□□ -1.87
CACNA1FO60840 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.37□□□□□ -1.87
CACNA1FO60840 RNU6-88P-201ENST00000606801 100 ntBASIC3.37□□□□□ -1.87
CACNA1FO60840 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.37□□□□□ -1.87
CACNA1FO60840 AC105429.2-201ENST00000610567 517 ntBASIC3.37□□□□□ -1.87
CACNA1FO60840 AC087241.4-201ENST00000612441 480 ntBASIC3.37□□□□□ -1.87
CACNA1FO60840 AC018755.4-201ENST00000619715 454 ntBASIC3.37□□□□□ -1.87
CACNA1FO60840 AC009878.1-201ENST00000621819 340 ntBASIC3.37□□□□□ -1.87
CACNA1FO60840 PCMTD1P7-201ENST00000634506 357 ntBASIC3.37□□□□□ -1.87
CACNA1FO60840 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CACNA1FO60840 Y_RNA.3-201ENST00000362331 103 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 RNU6-500P-201ENST00000362349 107 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 SNORA62.2-201ENST00000364672 152 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.36□□□□□ -1.87
CACNA1FO60840 Y_RNA.516-201ENST00000384541 124 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 SNORA67.4-201ENST00000384688 142 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 OR51A3P-201ENST00000413596 924 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.36□□□□□ -1.87
CACNA1FO60840 AL031736.2-201ENST00000426573 787 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 AL512286.1-201ENST00000439244 400 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.36□□□□□ -1.87
CACNA1FO60840 AL590399.6-201ENST00000446396 307 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 COX6CP18-201ENST00000448769 222 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.36□□□□□ -1.87
CACNA1FO60840 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.36□□□□□ -1.87
CACNA1FO60840 AC096725.1-201ENST00000514266 313 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.36□□□□□ -1.87
CACNA1FO60840 AC106038.2-201ENST00000520706 568 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 AC087276.1-201ENST00000529659 480 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.36□□□□□ -1.87
CACNA1FO60840 AC087683.1-201ENST00000591187 441 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 RNA5SP108-201ENST00000605921 117 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 AC004223.4-201ENST00000612426 332 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 Z99129.1-201ENST00000612510 255 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 MIR7844-201ENST00000616161 122 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CACNA1FO60840 AC015726.3-201ENST00000624501 418 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CACNA1FO60840 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.36□□□□□ -1.87
CACNA1FO60840 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CACNA1FO60840 AP006437.1-201ENST00000641440 3685 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 RNU6-1066P-201ENST00000363573 105 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 RNU6-619P-201ENST00000365146 108 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 MIR592-201ENST00000384959 97 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.36□□□□□ -1.87
CACNA1FO60840 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.36□□□□□ -1.87
CACNA1FO60840 AC093899.1-201ENST00000457984 376 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.36□□□□□ -1.87
CACNA1FO60840 AC005178.1-201ENST00000508392 440 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 AC079140.3-201ENST00000511111 550 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 RNU6-1178P-201ENST00000516674 107 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.36□□□□□ -1.87
CACNA1FO60840 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.36□□□□□ -1.87
CACNA1FO60840 AP001207.1-201ENST00000524051 481 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 AP003392.2-201ENST00000527269 208 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.36□□□□□ -1.87
CACNA1FO60840 AC087883.1-201ENST00000551882 391 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.36□□□□□ -1.87
CACNA1FO60840 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 U6atac.1-201ENST00000616025 117 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CACNA1FO60840 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CACNA1FO60840 AL356596.1-201ENST00000624230 379 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 AC092192.1-201ENST00000633154 1018 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 AC009487.4-201ENST00000624969 3585 ntBASIC3.36□□□□□ -1.87
CACNA1FO60840 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CACNA1FO60840 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.35□□□□□ -1.87
CACNA1FO60840 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
CACNA1FO60840 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms