Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 ATG3P1-201ENST00000419507 911 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 OR2AH1P-201ENST00000425717 928 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 RPL23AP69-201ENST00000431134 458 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXA3O43365 RPL7P28-201ENST00000437739 740 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXA3O43365 AL359073.1-201ENST00000448036 403 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 AC104472.2-201ENST00000469035 601 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXA3O43365 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 GMPSP1-201ENST00000514075 579 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 ENPP7P9-201ENST00000514456 627 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 SMURF2P1-201ENST00000514992 481 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 SNORA31.3-201ENST00000516029 96 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 RNU6-1213P-201ENST00000517075 94 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 RANP9-201ENST00000519957 271 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 AC022634.1-201ENST00000520765 532 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 AC022884.2-201ENST00000578535 580 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXA3O43365 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXA3O43365 AC069061.3-201ENST00000582254 823 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXA3O43365 AC136443.5-201ENST00000603741 370 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 AC010378.1-201ENST00000619270 362 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 MIR6853-201ENST00000619642 74 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 AL353748.2-201ENST00000622148 471 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
HOXA3O43365 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXA3O43365 MTND5P19-201ENST00000424872 1794 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
HOXA3O43365 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
HOXA3O43365 MAPK10-320ENST00000641462 6696 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXA3O43365 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
HOXA3O43365 MFSD8-216ENST00000641147 4009 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA3O43365 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
HOXA3O43365 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXA3O43365 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA3O43365 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
HOXA3O43365 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA3O43365 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA3O43365 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA3O43365 PRO1804-201ENST00000623780 2050 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 RNU6-310P-201ENST00000384655 107 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HOXA3O43365 RNA5SP332-201ENST00000391063 115 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 AL080315.1-201ENST00000406055 466 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA3O43365 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXA3O43365 BX510359.2-201ENST00000417920 305 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.92□□□□□ -1.78
HOXA3O43365 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXA3O43365 AL160275.3-201ENST00000423876 471 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA3O43365 AC005154.2-201ENST00000438110 379 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 MTND3P2-201ENST00000438452 342 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 TDGF1P1-201ENST00000445734 527 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 AC010326.1-201ENST00000462726 602 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 AC117503.1-201ENST00000472241 394 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXA3O43365 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.92□□□□□ -1.78
HOXA3O43365 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXA3O43365 RNU6-1332P-201ENST00000516666 104 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.92□□□□□ -1.78
HOXA3O43365 RNU6-988P-201ENST00000519081 107 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA3O43365 AC006349.1-201ENST00000555526 235 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXA3O43365 HNRNPCP4-201ENST00000571636 900 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXA3O43365 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA3O43365 FAM27B-201ENST00000610601 213 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 AC133104.2-201ENST00000615272 193 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 MIR6128-201ENST00000615528 109 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 ATP5A1P2-202ENST00000616464 443 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 AC098657.3-201ENST00000620434 263 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 AC022418.1-201ENST00000624118 445 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 CR381572.2-201ENST00000624852 397 ntBASIC3.92□□□□□ -1.78
HOXA3O43365 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA3O43365 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HOXA3O43365 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXA3O43365 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA3O43365 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXA3O43365 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXA3O43365 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXA3O43365 AC022893.2-201ENST00000564832 3296 ntBASIC3.91□□□□□ -1.78
HOXA3O43365 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXA3O43365 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXA3O43365 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXA3O43365 AL590240.1-201ENST00000334118 313 ntBASIC3.91□□□□□ -1.78
HOXA3O43365 Y_RNA.112-201ENST00000363250 102 ntBASIC3.91□□□□□ -1.78
HOXA3O43365 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXA3O43365 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXA3O43365 RNU6-128P-201ENST00000383976 107 ntBASIC3.91□□□□□ -1.78
HOXA3O43365 RNU6-1074P-201ENST00000383995 104 ntBASIC3.91□□□□□ -1.78
HOXA3O43365 RNU6-817P-201ENST00000391083 104 ntBASIC3.91□□□□□ -1.78
HOXA3O43365 AL590704.1-201ENST00000402856 794 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms