Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RPL21P32-201ENST00000419877 477 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 AL137014.1-201ENST00000420490 1226 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.05□□□□□ -2.08
UBFD1O14562 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.05□□□□□ -2.08
UBFD1O14562 AC005345.1-201ENST00000431868 217 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.05□□□□□ -2.08
UBFD1O14562 MTCYBP34-201ENST00000439552 670 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.05□□□□□ -2.08
UBFD1O14562 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.05□□□□□ -2.08
UBFD1O14562 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.05□□□□□ -2.08
UBFD1O14562 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.05□□□□□ -2.08
UBFD1O14562 snoU13.23-201ENST00000458863 104 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 AC025181.1-201ENST00000477507 416 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
UBFD1O14562 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.05□□□□□ -2.08
UBFD1O14562 MRPL42P6-201ENST00000486397 371 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 AC109486.1-201ENST00000486833 374 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 AC084024.2-201ENST00000503480 791 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 AC093767.1-201ENST00000504523 156 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 AC010468.3-201ENST00000508225 458 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
UBFD1O14562 RANP3-201ENST00000530970 276 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.05□□□□□ -2.08
UBFD1O14562 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.05□□□□□ -2.08
UBFD1O14562 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.05□□□□□ -2.08
UBFD1O14562 MTCO1P40-201ENST00000574371 625 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.05□□□□□ -2.08
UBFD1O14562 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.05□□□□□ -2.08
UBFD1O14562 GLUD1P4-201ENST00000590914 418 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.05□□□□□ -2.08
UBFD1O14562 GAS5-AS1-201ENST00000602767 694 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 HSPE1P7-201ENST00000604681 321 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 AC106028.5-201ENST00000610332 395 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 MIR6076-201ENST00000617521 113 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 SGO1P1-201ENST00000603525 1447 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 NUP58P1-201ENST00000502546 1738 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
UBFD1O14562 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
UBFD1O14562 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
UBFD1O14562 RNA5SP37-201ENST00000365420 130 ntBASIC2.04□□□□□ -2.08
UBFD1O14562 MIR16-1-201ENST00000385271 89 ntBASIC2.04□□□□□ -2.08
UBFD1O14562 RPS4XP3-201ENST00000398541 413 ntBASIC2.04□□□□□ -2.08
UBFD1O14562 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
UBFD1O14562 RN7SKP223-201ENST00000410582 62 ntBASIC2.04□□□□□ -2.08
UBFD1O14562 RPS15AP38-201ENST00000413110 372 ntBASIC2.04□□□□□ -2.08
UBFD1O14562 FCF1P2-201ENST00000415284 583 ntBASIC2.04□□□□□ -2.08
UBFD1O14562 Z75741.2-201ENST00000417272 1167 ntBASIC2.04□□□□□ -2.08
UBFD1O14562 AC099677.1-201ENST00000420575 175 ntBASIC2.04□□□□□ -2.08
UBFD1O14562 USP9YP8-201ENST00000441913 500 ntBASIC2.04□□□□□ -2.08
UBFD1O14562 HMGN1P5-201ENST00000448591 263 ntBASIC2.04□□□□□ -2.08
UBFD1O14562 NDUFA5P7-201ENST00000452914 242 ntBASIC2.04□□□□□ -2.08
UBFD1O14562 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.04□□□□□ -2.08
UBFD1O14562 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.04□□□□□ -2.08
UBFD1O14562 CDC42P1-201ENST00000456658 548 ntBASIC2.04□□□□□ -2.08
UBFD1O14562 RNU7-140P-201ENST00000459546 60 ntBASIC2.04□□□□□ -2.08
UBFD1O14562 AC025033.1-201ENST00000463883 194 ntBASIC2.04□□□□□ -2.08
UBFD1O14562 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.04□□□□□ -2.08
UBFD1O14562 AC018630.1-201ENST00000541376 925 ntBASIC2.04□□□□□ -2.08
UBFD1O14562 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.04□□□□□ -2.08
UBFD1O14562 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.04□□□□□ -2.08
UBFD1O14562 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.04□□□□□ -2.08
UBFD1O14562 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.04□□□□□ -2.08
UBFD1O14562 AC245517.5-201ENST00000611529 162 ntBASIC2.04□□□□□ -2.08
UBFD1O14562 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
UBFD1O14562 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
UBFD1O14562 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
UBFD1O14562 AC104454.1-201ENST00000421341 1401 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
UBFD1O14562 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
UBFD1O14562 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
UBFD1O14562 RNA5SP138-201ENST00000365098 114 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 SNORD116-23-201ENST00000384645 92 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
UBFD1O14562 AC016769.3-201ENST00000396562 315 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.03□□□□□ -2.08
UBFD1O14562 MTND4LP10-201ENST00000435146 291 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
UBFD1O14562 IFNA11P-201ENST00000446352 526 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 GXYLT1P1-201ENST00000446657 490 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 OR6K5P-201ENST00000447050 945 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 AL590664.1-201ENST00000448065 339 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 AL096803.2-201ENST00000450032 677 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.03□□□□□ -2.08
UBFD1O14562 GTF2IP12-201ENST00000456547 356 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 MTCO3P2-201ENST00000457365 171 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.03□□□□□ -2.08
UBFD1O14562 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.03□□□□□ -2.08
UBFD1O14562 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.03□□□□□ -2.08
UBFD1O14562 AC090096.1-201ENST00000489168 390 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.03□□□□□ -2.08
UBFD1O14562 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.03□□□□□ -2.08
UBFD1O14562 RNU6-1095P-201ENST00000516148 108 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 RNU6-885P-201ENST00000516607 104 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.03□□□□□ -2.08
UBFD1O14562 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
UBFD1O14562 ZNF705CP-201ENST00000530515 889 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 EEF1B2P4-201ENST00000551398 348 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.03□□□□□ -2.08
UBFD1O14562 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.03□□□□□ -2.08
UBFD1O14562 AL121917.1-203ENST00000605534 577 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms