Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.74□□□□□ -2.13
SDCBPO00560 GLYCAM1-201ENST00000546596 285 ntBASIC1.74□□□□□ -2.13
SDCBPO00560 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.74□□□□□ -2.13
SDCBPO00560 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.74□□□□□ -2.13
SDCBPO00560 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SDCBPO00560 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.74□□□□□ -2.13
SDCBPO00560 AC026464.5-201ENST00000562497 722 ntBASIC1.74□□□□□ -2.13
SDCBPO00560 AC010738.1-201ENST00000604970 987 ntBASIC1.74□□□□□ -2.13
SDCBPO00560 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SDCBPO00560 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.74□□□□□ -2.13
SDCBPO00560 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.74□□□□□ -2.13
SDCBPO00560 CU459211.1-201ENST00000635667 749 ntBASIC1.74□□□□□ -2.13
SDCBPO00560 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.74□□□□□ -2.13
SDCBPO00560 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SDCBPO00560 AL109809.4-201ENST00000603520 2185 ntBASIC1.74□□□□□ -2.13
SDCBPO00560 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SDCBPO00560 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SDCBPO00560 SNORA51.6-201ENST00000384151 125 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 MIR16-1-201ENST00000385271 89 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SDCBPO00560 SNORD65C-201ENST00000390962 71 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 RNU6-1197P-201ENST00000391183 107 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 AC016769.3-201ENST00000396562 315 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 AL513475.1-201ENST00000406602 315 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 RPL17P12-201ENST00000413391 526 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 FCF1P2-201ENST00000415284 583 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 AL135786.1-201ENST00000415892 214 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 AL356320.1-201ENST00000429616 163 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.73□□□□□ -2.13
SDCBPO00560 UBE2V1P13-201ENST00000436983 439 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.73□□□□□ -2.13
SDCBPO00560 AL121871.1-201ENST00000443413 436 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 RAC1P7-201ENST00000445367 377 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.73□□□□□ -2.13
SDCBPO00560 EIF4EP3-201ENST00000498782 656 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 AC104090.1-201ENST00000506341 1171 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 AC113155.1-201ENST00000511141 769 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 AC008413.1-201ENST00000511864 177 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 RNU6-751P-201ENST00000516382 101 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.73□□□□□ -2.13
SDCBPO00560 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.73□□□□□ -2.13
SDCBPO00560 TRAV28-201ENST00000557548 323 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 MIR3117-201ENST00000584034 78 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 MIR4448-201ENST00000584360 86 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 RN7SL622P-201ENST00000585292 275 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 GAS5-AS1-201ENST00000602767 694 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 KATNBL1P1-201ENST00000605192 748 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 BNIP3P19-201ENST00000605397 577 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 AP000254.1-201ENST00000609934 520 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 AC025588.4-201ENST00000615802 908 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
SDCBPO00560 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.73□□□□□ -2.13
SDCBPO00560 MIR6852-201ENST00000621699 66 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
SDCBPO00560 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.73□□□□□ -2.13
SDCBPO00560 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.73□□□□□ -2.13
SDCBPO00560 SGO1P1-201ENST00000603525 1447 ntBASIC1.73□□□□□ -2.13
SDCBPO00560 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.73□□□□□ -2.13
SDCBPO00560 AC004944.1-201ENST00000517807 3059 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.72□□□□□ -2.13
SDCBPO00560 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SDCBPO00560 CR848007.1-201ENST00000442354 1699 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SDCBPO00560 RNU1-52P-201ENST00000384190 164 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 SNORD51-201ENST00000384320 80 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 SNORD116-23-201ENST00000384645 92 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 MIR524-201ENST00000385242 87 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 RNU6-882P-201ENST00000391025 103 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 AL121978.1-201ENST00000402778 359 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 AL024474.1-201ENST00000404655 591 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 RNA5SP508-201ENST00000411327 119 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.72□□□□□ -2.13
SDCBPO00560 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.72□□□□□ -2.13
SDCBPO00560 AC027124.2-201ENST00000428249 105 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.72□□□□□ -2.13
SDCBPO00560 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.72□□□□□ -2.13
SDCBPO00560 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.72□□□□□ -2.13
SDCBPO00560 Z82190.1-201ENST00000454534 490 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 FAM172BP-201ENST00000487497 1089 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 AC084024.2-201ENST00000503480 791 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 AC006390.1-201ENST00000508068 283 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 AC109464.2-201ENST00000510242 943 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 RNU6-928P-201ENST00000516876 104 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.72□□□□□ -2.13
SDCBPO00560 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SDCBPO00560 AC124293.1-201ENST00000530034 493 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.72□□□□□ -2.13
SDCBPO00560 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.72□□□□□ -2.13
SDCBPO00560 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.72□□□□□ -2.13
SDCBPO00560 OR11H5P-201ENST00000554039 926 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.72□□□□□ -2.13
SDCBPO00560 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.72□□□□□ -2.13
SDCBPO00560 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.72□□□□□ -2.13
SDCBPO00560 AP002826.1-201ENST00000608835 315 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 AC245884.12-201ENST00000615364 59 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 AC010378.1-201ENST00000619270 362 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.72□□□□□ -2.13
SDCBPO00560 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
SDCBPO00560 ZNF663P-202ENST00000641770 1131 ntBASIC1.72□□□□□ -2.13
SDCBPO00560 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms