Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC093716.1-201ENST00000435923 377 ntBASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 RPL35AP22-201ENST00000436855 335 ntBASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 AL121601.2-201ENST00000438019 707 ntBASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 AL135752.1-201ENST00000479477 471 ntBASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 AC093801.2-201ENST00000503966 1050 ntBASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 AC091917.2-201ENST00000505002 744 ntBASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 ERHP1-201ENST00000523006 310 ntBASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 AP004371.1-201ENST00000525240 214 ntBASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 AL354943.1-201ENST00000572103 781 ntBASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 SEPT7P9-203ENST00000604116 343 ntBASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 AC019131.2-201ENST00000609071 870 ntBASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 RNU6-629P-201ENST00000384061 103 ntBASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 AL512504.1-201ENST00000415494 778 ntBASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 HMGB1P27-201ENST00000431429 603 ntBASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 RPS24P6-201ENST00000452670 400 ntBASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 RPS29P29-201ENST00000456396 171 ntBASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 HMGN2P23-201ENST00000456759 269 ntBASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 AC004223.1-201ENST00000479840 271 ntBASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 MTND3P6-201ENST00000485242 339 ntBASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 AC104685.1-201ENST00000502445 371 ntBASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 HMGB1P24-202ENST00000615653 685 ntBASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 AC073592.7-201ENST00000623659 507 ntBASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 AC110079.1-202ENST00000635213 138 ntBASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 MIR4496-201ENST00000635896 61 ntBASIC1.17□□□□□ -2.22
CPSF4LA6NMK7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 MIR676-201ENST00000390702 67 ntBASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 RNA5SP213-201ENST00000391031 106 ntBASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 DNAJC19P6-201ENST00000401853 280 ntBASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 USP9YP6-201ENST00000413550 854 ntBASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 LUZP4P1-201ENST00000415420 344 ntBASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 AL591806.2-201ENST00000433122 173 ntBASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 RNA5SP233-201ENST00000459153 113 ntBASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 AC010285.1-201ENST00000470580 392 ntBASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 AC090821.2-201ENST00000523552 176 ntBASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 AGGF1P5-201ENST00000567900 919 ntBASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 AC096586.2-201ENST00000610260 441 ntBASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 AC011472.4-201ENST00000615848 491 ntBASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CPSF4LA6NMK7 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.15□□□□□ -2.22
CPSF4LA6NMK7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.22
CPSF4LA6NMK7 SNORA3A-201ENST00000364113 130 ntBASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 SNORA16B-201ENST00000364674 135 ntBASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 MIR17-201ENST00000385012 84 ntBASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 MIR764-201ENST00000390811 85 ntBASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 MTCO3P46-201ENST00000425787 232 ntBASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 AP000949.1-201ENST00000438328 629 ntBASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 RPL31P20-201ENST00000449593 360 ntBASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 RNU7-26P-201ENST00000458980 63 ntBASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 AC117532.1-201ENST00000514638 323 ntBASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 RN7SKP277-201ENST00000516895 283 ntBASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 AC009977.1-201ENST00000586015 570 ntBASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 MIR7843-201ENST00000622274 79 ntBASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 AC068620.4-201ENST00000636730 1182 ntBASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.15□□□□□ -2.23
CPSF4LA6NMK7 FAM133CP-201ENST00000332869 704 ntBASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 U8.10-201ENST00000384260 133 ntBASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 SNORA40.6-201ENST00000391153 128 ntBASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 SNORA17.3-201ENST00000391159 129 ntBASIC1.14□□□□□ -2.23
CPSF4LA6NMK7 SNORD23.1-201ENST00000408212 104 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms