Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 SPA17P1-201ENST00000416656 452 ntBASIC3.6□□□□□ -1.83
LRRC53A6NM62 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.6□□□□□ -1.83
LRRC53A6NM62 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.6□□□□□ -1.83
LRRC53A6NM62 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.6□□□□□ -1.83
LRRC53A6NM62 TIMM9P1-201ENST00000436122 256 ntBASIC3.6□□□□□ -1.83
LRRC53A6NM62 RPL35AP22-201ENST00000436855 335 ntBASIC3.6□□□□□ -1.83
LRRC53A6NM62 RABEPKP1-201ENST00000440529 1026 ntBASIC3.6□□□□□ -1.83
LRRC53A6NM62 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.6□□□□□ -1.83
LRRC53A6NM62 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.6□□□□□ -1.83
LRRC53A6NM62 RPL23AP62-201ENST00000463396 453 ntBASIC3.6□□□□□ -1.83
LRRC53A6NM62 RPS15AP36-201ENST00000492022 382 ntBASIC3.6□□□□□ -1.83
LRRC53A6NM62 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.6□□□□□ -1.83
LRRC53A6NM62 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.6□□□□□ -1.83
LRRC53A6NM62 IGKV2-26-201ENST00000518305 343 ntBASIC3.6□□□□□ -1.83
LRRC53A6NM62 AP002453.2-201ENST00000533503 320 ntBASIC3.6□□□□□ -1.83
LRRC53A6NM62 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.6□□□□□ -1.83
LRRC53A6NM62 MIR3146-201ENST00000580367 79 ntBASIC3.6□□□□□ -1.83
LRRC53A6NM62 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.6□□□□□ -1.83
LRRC53A6NM62 AC011468.4-201ENST00000603942 409 ntBASIC3.6□□□□□ -1.83
LRRC53A6NM62 AC121334.2-201ENST00000605387 271 ntBASIC3.6□□□□□ -1.83
LRRC53A6NM62 RNU6-87P-201ENST00000607561 108 ntBASIC3.6□□□□□ -1.83
LRRC53A6NM62 AC090425.2-201ENST00000608818 501 ntBASIC3.6□□□□□ -1.83
LRRC53A6NM62 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.6□□□□□ -1.83
LRRC53A6NM62 BX664608.1-201ENST00000610519 487 ntBASIC3.6□□□□□ -1.83
LRRC53A6NM62 AC245517.5-201ENST00000611529 162 ntBASIC3.6□□□□□ -1.83
LRRC53A6NM62 AC093838.1-201ENST00000613014 469 ntBASIC3.6□□□□□ -1.83
LRRC53A6NM62 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.6□□□□□ -1.83
LRRC53A6NM62 AC095031.1-201ENST00000623685 672 ntBASIC3.6□□□□□ -1.83
LRRC53A6NM62 AC009093.8-201ENST00000641769 292 ntBASIC3.6□□□□□ -1.83
LRRC53A6NM62 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.6□□□□□ -1.83
LRRC53A6NM62 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC53A6NM62 AC092104.1-201ENST00000497346 1441 ntBASIC3.6□□□□□ -1.83
LRRC53A6NM62 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
LRRC53A6NM62 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
LRRC53A6NM62 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC53A6NM62 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.59□□□□□ -1.83
LRRC53A6NM62 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC53A6NM62 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
LRRC53A6NM62 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC53A6NM62 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC53A6NM62 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC53A6NM62 RPL7P26-201ENST00000333817 754 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 RNU1-70P-201ENST00000362618 164 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 RNU5A-8P-201ENST00000364102 114 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 RNU4-24P-201ENST00000364565 139 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 RNY4P16-201ENST00000364768 94 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.59□□□□□ -1.83
LRRC53A6NM62 UBE2FP1-201ENST00000416536 447 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 AC245291.1-201ENST00000419501 328 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.59□□□□□ -1.83
LRRC53A6NM62 RPS15AP6-201ENST00000420703 385 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC53A6NM62 AL589872.1-201ENST00000426602 288 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.59□□□□□ -1.83
LRRC53A6NM62 ARF4P2-201ENST00000430209 526 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC53A6NM62 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC53A6NM62 MTND6P13-201ENST00000443510 523 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC53A6NM62 RBMY2UP-201ENST00000453474 324 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC53A6NM62 RNU7-59P-201ENST00000459101 61 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 MTND1P3-201ENST00000484956 952 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 LARP1BP2-201ENST00000486594 519 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.59□□□□□ -1.83
LRRC53A6NM62 ARL2BPP4-201ENST00000506854 471 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 NDUFB4P2-201ENST00000509515 391 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 AC079140.3-201ENST00000511111 550 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 RNU1-143P-201ENST00000516296 146 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 HMGN1P28-201ENST00000521340 364 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC53A6NM62 AC024909.2-201ENST00000553035 286 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC53A6NM62 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC53A6NM62 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC53A6NM62 MIR3611-201ENST00000584484 83 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC53A6NM62 CKS1BP3-201ENST00000600888 237 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 U1.23-201ENST00000610293 146 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 AC131902.3-201ENST00000611767 581 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC53A6NM62 TUG1_2.1-201ENST00000614234 87 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.59□□□□□ -1.83
LRRC53A6NM62 RNU1-68P-201ENST00000615382 146 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 AC108479.2-201ENST00000617314 601 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 SNORD39.4-201ENST00000620099 78 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 U1.39-201ENST00000621562 146 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 AL136313.1-201ENST00000624804 202 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
LRRC53A6NM62 AL021368.2-201ENST00000606125 5352 ntBASIC3.59□□□□□ -1.83
LRRC53A6NM62 AC092326.2-201ENST00000624772 1561 ntBASIC3.59□□□□□ -1.84
LRRC53A6NM62 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
LRRC53A6NM62 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.58□□□□□ -1.84
LRRC53A6NM62 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.58□□□□□ -1.84
LRRC53A6NM62 DDX10P1-201ENST00000448545 1933 ntBASIC3.58□□□□□ -1.84
LRRC53A6NM62 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC53A6NM62 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC53A6NM62 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.58□□□□□ -1.84
LRRC53A6NM62 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms