Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 U3.3-201ENST00000362986 216 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 RN7SKP115-201ENST00000363177 317 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 Y_RNA.126-201ENST00000363382 111 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 RNU4-42P-201ENST00000364738 142 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 SNORA51.8-201ENST00000384234 132 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 SNORA36C-201ENST00000384289 132 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 RNU6-790P-201ENST00000384479 105 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 RNA5SP487-201ENST00000410186 122 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 AC063979.1-201ENST00000415539 377 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 MTATP6P4-201ENST00000427725 675 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 AL031274.1-201ENST00000450334 232 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 RPS17P2-201ENST00000461663 408 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 AC092324.1-201ENST00000468671 324 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 RN7SL717P-201ENST00000478343 297 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 AC069499.1-201ENST00000489433 509 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 AC020890.1-201ENST00000491837 504 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 AC022447.4-201ENST00000504053 364 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 RNU6-1143P-201ENST00000516125 104 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 AC040926.1-201ENST00000530195 238 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 AC005951.2-201ENST00000576282 495 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 MIR3614-201ENST00000581261 86 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 AC233702.9-201ENST00000581528 203 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 SNORD84-203ENST00000584275 78 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 AC068790.4-201ENST00000602474 263 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 AC004805.2-201ENST00000605382 482 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 AL353748.2-201ENST00000622148 471 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 AP001273.1-201ENST00000624493 3152 ntBASIC4.44□□□□□ -1.7
SHISA3A0PJX4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SHISA3A0PJX4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 SNORA2.3-201ENST00000383920 135 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 RNU6-472P-201ENST00000384299 107 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 MIR105-1-201ENST00000385222 81 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 SNORD73A-201ENST00000386062 65 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 AL592291.1-201ENST00000403830 352 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 AL080315.1-201ENST00000406055 466 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 RNU2-3P-201ENST00000410144 191 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 RNU6-1156P-201ENST00000410365 100 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 SDHDP6-201ENST00000414693 480 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 AC093414.1-201ENST00000434712 514 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 AL691482.1-201ENST00000453255 87 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 AC009963.2-201ENST00000453431 138 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 AC087588.1-201ENST00000462203 316 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 RN7SL441P-201ENST00000492388 296 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 AC023157.2-201ENST00000540596 141 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 NDUFB4P11-201ENST00000560510 395 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 MIR5188-201ENST00000583467 113 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 AC011445.2-201ENST00000599274 173 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 RMST_4.1-201ENST00000616886 107 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHISA3A0PJX4 AC083843.3-201ENST00000623679 2186 ntBASIC4.43□□□□□ -1.7
SHISA3A0PJX4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SHISA3A0PJX4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms