Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC007656.2-201ENST00000624902 4547 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 RPL21P132-201ENST00000331267 462 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 RNU6-433P-201ENST00000363216 104 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 TAS2R15P-201ENST00000390674 928 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AL356421.1-201ENST00000403255 413 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 MIR320C1-201ENST00000408566 88 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 RN7SKP285-201ENST00000410137 318 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC098592.1-201ENST00000419352 333 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 NDUFB4P7-201ENST00000423198 363 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC006989.1-201ENST00000427212 131 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC093392.2-201ENST00000450682 337 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC091179.1-201ENST00000461606 579 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 RPL30P9-201ENST00000465586 330 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 RPL31P60-201ENST00000478450 367 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC021382.1-201ENST00000483523 359 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 HMGB1P36-201ENST00000487709 576 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 OR5G4P-201ENST00000525251 760 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 OR5AP1P-201ENST00000529730 940 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC002400.1-201ENST00000569310 726 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 Z99289.3-201ENST00000605586 594 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC027309.3-201ENST00000623419 351 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AL356596.1-201ENST00000624230 379 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC127502.3-201ENST00000636170 1206 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 AC004944.1-201ENST00000517807 3059 ntBASIC3.25□□□□□ -1.89
PCDHGA1Q9Y5H4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 RNU6-223P-201ENST00000362830 107 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 RNU6-744P-201ENST00000365557 107 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 RNA5SP88-201ENST00000365560 109 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 RNU6-637P-201ENST00000384050 107 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 RNU6-1316P-201ENST00000384242 108 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 RNU6-1207P-201ENST00000384343 107 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 RN7SKP266-201ENST00000410232 287 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 RAP1BP1-201ENST00000412709 553 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 RPL7L1P10-201ENST00000427790 463 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AL158071.1-201ENST00000430315 461 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 RPL35AP22-201ENST00000436855 335 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AL117351.1-201ENST00000438864 766 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC112653.1-201ENST00000443851 386 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC009237.8-201ENST00000445492 379 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 FTH1P25-201ENST00000447665 469 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 RNU6-420P-201ENST00000458780 107 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC104472.2-201ENST00000469035 601 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 SETP11-201ENST00000473027 690 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC004263.1-201ENST00000479327 332 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC096576.1-201ENST00000489014 359 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC006445.1-201ENST00000491925 405 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC021146.5-201ENST00000503544 545 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC021678.1-201ENST00000505195 936 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC112198.1-201ENST00000505369 1220 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 LTV1P1-201ENST00000510683 1237 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC034159.1-201ENST00000513885 583 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 ISCA1P3-201ENST00000577104 373 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC008751.2-201ENST00000597885 980 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC009464.1-201ENST00000615731 469 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC079597.1-201ENST00000624306 508 ntBASIC3.24□□□□□ -1.89
PCDHGA1Q9Y5H4 AC009039.2-201ENST00000624524 529 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms