Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
NOD1Q9Y239 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NOD1Q9Y239 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NOD1Q9Y239 FAM91A3P-201ENST00000456826 2544 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NOD1Q9Y239 Y_RNA.126-201ENST00000363382 111 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 SNORD73A-201ENST00000386062 65 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NOD1Q9Y239 AC119751.6-201ENST00000416712 186 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 DNAJC19P7-201ENST00000428811 344 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 AL133396.1-201ENST00000432048 687 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NOD1Q9Y239 REG1CP-206ENST00000447469 496 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 AL031274.1-201ENST00000450334 232 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 snoU13.3-201ENST00000459441 104 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 AP000942.1-201ENST00000463969 747 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 RN7SL443P-201ENST00000464331 290 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 FTH1P2-201ENST00000466086 412 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.65□□□□□ -1.5
NOD1Q9Y239 IGLV2-34-201ENST00000490007 283 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 MTND3P25-201ENST00000509243 135 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.65□□□□□ -1.5
NOD1Q9Y239 RNA5SP43-201ENST00000516559 110 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 Y_RNA.715-201ENST00000517082 110 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NOD1Q9Y239 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.65□□□□□ -1.5
NOD1Q9Y239 AC011626.1-201ENST00000604710 562 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 MIR4272-201ENST00000635924 64 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NOD1Q9Y239 AL022322.2-201ENST00000624072 20397 ntBASIC5.65□□□□□ -1.51
NOD1Q9Y239 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NOD1Q9Y239 PRO1804-201ENST00000623780 2050 ntBASIC5.65□□□□□ -1.51
NOD1Q9Y239 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
NOD1Q9Y239 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.65□□□□□ -1.51
NOD1Q9Y239 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NOD1Q9Y239 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
NOD1Q9Y239 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.64□□□□□ -1.51
NOD1Q9Y239 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
NOD1Q9Y239 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NOD1Q9Y239 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.64□□□□□ -1.51
NOD1Q9Y239 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NOD1Q9Y239 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NOD1Q9Y239 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.64□□□□□ -1.51
NOD1Q9Y239 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.64□□□□□ -1.51
NOD1Q9Y239 C4BPAP2-201ENST00000428434 478 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 AL353997.1-201ENST00000432936 108 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.64□□□□□ -1.51
NOD1Q9Y239 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.64□□□□□ -1.51
NOD1Q9Y239 AC011753.3-201ENST00000443436 406 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 AL354714.3-201ENST00000447284 493 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 OR1H1P-201ENST00000448731 937 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 AC090804.1-201ENST00000448870 490 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 RPL23AP31-201ENST00000456160 467 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 RN7SL354P-201ENST00000469282 294 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 RN7SL346P-201ENST00000491561 294 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 RNU2-53P-201ENST00000516257 147 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 RNU6-914P-201ENST00000516749 109 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 AC008694.2-201ENST00000517591 306 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.64□□□□□ -1.51
NOD1Q9Y239 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.64□□□□□ -1.51
NOD1Q9Y239 HMGB3P26-201ENST00000560051 582 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 AC091042.1-201ENST00000579213 173 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 AC078899.3-201ENST00000599065 212 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 AC005344.1-201ENST00000613391 459 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NOD1Q9Y239 AL138825.1-201ENST00000618587 192 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 AC138627.2-201ENST00000624202 601 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
NOD1Q9Y239 AC090971.4-201ENST00000560291 1800 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 AC004076.2-201ENST00000620532 3323 ntBASIC5.64□□□□□ -1.51
NOD1Q9Y239 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NOD1Q9Y239 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
NOD1Q9Y239 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.63□□□□□ -1.51
NOD1Q9Y239 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
NOD1Q9Y239 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NOD1Q9Y239 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NOD1Q9Y239 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NOD1Q9Y239 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.63□□□□□ -1.51
NOD1Q9Y239 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NOD1Q9Y239 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.63□□□□□ -1.51
NOD1Q9Y239 RNU6-790P-201ENST00000384479 105 ntBASIC5.63□□□□□ -1.51
NOD1Q9Y239 RNU4-70P-201ENST00000384579 139 ntBASIC5.63□□□□□ -1.51
NOD1Q9Y239 Y_RNA.552-201ENST00000384665 112 ntBASIC5.63□□□□□ -1.51
NOD1Q9Y239 Y_RNA.577-201ENST00000384794 101 ntBASIC5.63□□□□□ -1.51
NOD1Q9Y239 MIR578-201ENST00000384828 96 ntBASIC5.63□□□□□ -1.51
NOD1Q9Y239 MIR589-201ENST00000385238 99 ntBASIC5.63□□□□□ -1.51
NOD1Q9Y239 AL445529.1-201ENST00000398713 389 ntBASIC5.63□□□□□ -1.51
NOD1Q9Y239 RPL21P1-201ENST00000399532 476 ntBASIC5.63□□□□□ -1.51
NOD1Q9Y239 AL138785.1-201ENST00000425821 331 ntBASIC5.63□□□□□ -1.51
NOD1Q9Y239 NDUFB4P8-201ENST00000435351 367 ntBASIC5.63□□□□□ -1.51
NOD1Q9Y239 AC073264.2-201ENST00000448886 166 ntBASIC5.63□□□□□ -1.51
NOD1Q9Y239 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.63□□□□□ -1.51
NOD1Q9Y239 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.63□□□□□ -1.51
NOD1Q9Y239 RPS24P16-201ENST00000497294 392 ntBASIC5.63□□□□□ -1.51
NOD1Q9Y239 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.63□□□□□ -1.51
NOD1Q9Y239 SNRPGP16-201ENST00000533275 226 ntBASIC5.63□□□□□ -1.51
NOD1Q9Y239 AP006289.1-201ENST00000538089 277 ntBASIC5.63□□□□□ -1.51
NOD1Q9Y239 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.63□□□□□ -1.51
NOD1Q9Y239 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.63□□□□□ -1.51
NOD1Q9Y239 OR1M4P-201ENST00000589199 287 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms