Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AC079089.3-201ENST00000603094 673 ntBASIC1.76□□□□□ -2.13
HHLA3Q9XRX5 RPAP2P1-201ENST00000603626 1168 ntBASIC1.76□□□□□ -2.13
HHLA3Q9XRX5 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.76□□□□□ -2.13
HHLA3Q9XRX5 AP005137.2-201ENST00000609238 400 ntBASIC1.76□□□□□ -2.13
HHLA3Q9XRX5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HHLA3Q9XRX5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
HHLA3Q9XRX5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 CKAP2P1-201ENST00000555477 2049 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 RNA5SP68-201ENST00000363885 119 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 SET-203ENST00000372688 801 ntTSL 2 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 SNORA41-201ENST00000384675 132 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 RNU2-43P-201ENST00000410306 190 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC027644.1-201ENST00000419595 298 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 BEND7P1-201ENST00000422058 457 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 MTCYBP32-201ENST00000427945 1084 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AL512637.2-201ENST00000431287 1256 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AL714022.1-201ENST00000439897 151 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AL121871.1-201ENST00000443413 436 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AL513328.1-201ENST00000446460 224 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AL592447.1-201ENST00000447592 540 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AL353718.1-201ENST00000451028 517 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AL109933.2-201ENST00000452651 260 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 USP9YP34-201ENST00000453983 808 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC116337.2-201ENST00000477662 156 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AL135752.1-201ENST00000479477 471 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 RPL23AP70-201ENST00000483361 460 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC079804.2-201ENST00000490376 200 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 RPL30P5-201ENST00000494923 336 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC112518.2-201ENST00000508565 425 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 HMGB3P3-201ENST00000510526 400 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AL359273.1-201ENST00000510918 627 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 OR4R2P-201ENST00000530815 597 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AMZ2P1-203ENST00000565833 850 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC079148.1-201ENST00000565944 819 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 MIR3921-201ENST00000577308 85 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC103810.1-201ENST00000579873 453 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC124283.4-201ENST00000581815 456 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC011471.1-201ENST00000585766 187 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AL031176.1-201ENST00000604554 466 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AP003973.1-201ENST00000604639 691 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC026741.1-201ENST00000605892 482 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AP001521.1-201ENST00000609150 300 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC090132.2-201ENST00000615881 347 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC006213.4-201ENST00000616184 634 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC007998.5-201ENST00000622938 237 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC010872.1-201ENST00000624225 675 ntBASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
HHLA3Q9XRX5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 TPTE2P4-201ENST00000258589 1605 ntBASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 AL589826.1-201ENST00000340697 249 ntBASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 RNU6-492P-201ENST00000363035 104 ntBASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 SNORD114-30-201ENST00000364448 72 ntBASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 SNORA6-201ENST00000384033 151 ntBASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 VN1R10P-201ENST00000447106 875 ntBASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 AL353691.1-201ENST00000451332 387 ntBASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 AP001486.1-201ENST00000463339 476 ntBASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 AC092757.1-201ENST00000467293 467 ntBASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 AC104435.1-201ENST00000483483 166 ntBASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 AC090096.1-201ENST00000489168 390 ntBASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 AC113155.1-201ENST00000511141 769 ntBASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 OR5BM1P-201ENST00000512021 366 ntBASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 TTC39CP1-201ENST00000512513 755 ntBASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.74□□□□□ -2.13
HHLA3Q9XRX5 AC024224.1-201ENST00000538284 609 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms