Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.11□□□□□ -1.91
SMC3Q9UQE7 CR383656.7-201ENST00000548164 174 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AC011260.1-201ENST00000578420 472 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AC079089.3-201ENST00000603094 673 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AC009974.1-201ENST00000608881 455 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AC027449.1-201ENST00000608890 407 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AP000254.1-201ENST00000609934 520 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 PART1_2.1-201ENST00000612397 250 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AC023158.2-201ENST00000614876 543 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AC010297.1-201ENST00000623948 149 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AC120349.2-201ENST00000625002 298 ntBASIC3.11□□□□□ -1.91
SMC3Q9UQE7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
SMC3Q9UQE7 SNRPEP3-201ENST00000338402 276 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 DEFB108F-201ENST00000344638 222 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 RNA5SP393-201ENST00000363423 117 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SMC3Q9UQE7 SNORD116-12-201ENST00000384468 92 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 MIR135A2-201ENST00000384854 100 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 SNORA40.2-201ENST00000390847 128 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 RNA5SP21-201ENST00000410917 96 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 RNU4-22P-201ENST00000411058 166 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.1□□□□□ -1.91
SMC3Q9UQE7 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.1□□□□□ -1.91
SMC3Q9UQE7 AC087499.2-201ENST00000432861 149 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 NANOGP2-201ENST00000435391 727 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.1□□□□□ -1.91
SMC3Q9UQE7 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.1□□□□□ -1.91
SMC3Q9UQE7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.1□□□□□ -1.91
SMC3Q9UQE7 COX7A2P2-201ENST00000505291 250 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.1□□□□□ -1.91
SMC3Q9UQE7 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.1□□□□□ -1.91
SMC3Q9UQE7 TBCAP3-201ENST00000512475 312 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.1□□□□□ -1.91
SMC3Q9UQE7 RNU6-826P-201ENST00000516827 104 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 CASP1P1-201ENST00000526345 212 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 DEFB108D-201ENST00000527787 222 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SMC3Q9UQE7 AC123904.3-201ENST00000547218 814 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.1□□□□□ -1.91
SMC3Q9UQE7 MTCYBP23-201ENST00000558717 1102 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 MIR3609-201ENST00000582661 80 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 MIR4325-201ENST00000583049 90 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 AC245884.10-201ENST00000597355 337 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 AC013444.2-201ENST00000603317 787 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 AL049779.4-201ENST00000604500 156 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 AC007179.3-201ENST00000604976 235 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 AL136363.1-201ENST00000605349 337 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 AC245517.5-201ENST00000611529 162 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 AC027309.3-201ENST00000623419 351 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 AL078595.3-201ENST00000623815 1166 ntBASIC3.1□□□□□ -1.91
SMC3Q9UQE7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.1□□□□□ -1.91
SMC3Q9UQE7 AC008568.2-201ENST00000623862 2313 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 AC010680.1-201ENST00000590024 3590 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
SMC3Q9UQE7 AC073346.2-201ENST00000624724 2058 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SMC3Q9UQE7 AL450338.1-201ENST00000407987 512 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 AL356320.2-201ENST00000417263 507 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 BEND7P1-201ENST00000422058 457 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.09□□□□□ -1.91
SMC3Q9UQE7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.09□□□□□ -1.91
SMC3Q9UQE7 OFD1P3Y-201ENST00000453312 783 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 SUMO2P2-201ENST00000456482 255 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 AC026410.2-201ENST00000460281 156 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.09□□□□□ -1.91
SMC3Q9UQE7 RPS15AP17-201ENST00000470598 390 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.09□□□□□ -1.91
SMC3Q9UQE7 CDC42P4-201ENST00000510507 563 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 SNORA31.15-201ENST00000516771 132 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.09□□□□□ -1.91
SMC3Q9UQE7 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.09□□□□□ -1.91
SMC3Q9UQE7 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.09□□□□□ -1.91
SMC3Q9UQE7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.09□□□□□ -1.91
SMC3Q9UQE7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.09□□□□□ -1.91
SMC3Q9UQE7 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.09□□□□□ -1.91
SMC3Q9UQE7 AC023813.2-201ENST00000564321 469 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 AC009163.5-201ENST00000575421 637 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 MIR3921-201ENST00000577308 85 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 MIR4637-201ENST00000582405 84 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 VN1R83P-201ENST00000595685 445 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 BNIP3P40-201ENST00000596017 556 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 AL161756.2-201ENST00000604597 246 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 AC012468.1-201ENST00000604888 430 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 RNU4-5P-201ENST00000607255 135 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 AC096577.2-201ENST00000611455 153 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 AL138478.1-201ENST00000612252 832 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 MIR1322-201ENST00000638013 71 ntBASIC3.09□□□□□ -1.91
SMC3Q9UQE7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SMC3Q9UQE7 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SMC3Q9UQE7 SNORA44-201ENST00000384584 132 ntBASIC3.08□□□□□ -1.92
SMC3Q9UQE7 VN1R51P-201ENST00000411675 945 ntBASIC3.08□□□□□ -1.92
SMC3Q9UQE7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.08□□□□□ -1.92
SMC3Q9UQE7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.08□□□□□ -1.92
SMC3Q9UQE7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms