Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 IGHV5-78-201ENST00000450948 295 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 RNU7-187P-201ENST00000458985 68 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 AC010618.1-201ENST00000469924 477 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 AC018437.1-201ENST00000492214 406 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 HMGB1P35-201ENST00000503360 598 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 AC022447.4-201ENST00000504053 364 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 AC091912.1-201ENST00000511351 248 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 AC040926.1-201ENST00000530195 238 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 CR383656.7-201ENST00000548164 174 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 VN1R85P-201ENST00000601587 426 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 AC244107.2-201ENST00000611773 76 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 AL138825.1-201ENST00000618587 192 ntBASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ZC3H4Q9UPT8 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 Y_RNA.151-201ENST00000363566 112 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 SNORD113.2-201ENST00000364166 89 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 MIR134-201ENST00000385258 73 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 GPS2P1-201ENST00000411761 986 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 AF186996.5-201ENST00000418098 904 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 AL732292.1-201ENST00000426692 226 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 AC011816.1-201ENST00000441346 546 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 AL162389.1-201ENST00000449233 177 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 RPS24P16-201ENST00000497294 392 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 AC092436.3-201ENST00000511788 257 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 AC005798.1-201ENST00000513715 387 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 RNA5SP230-201ENST00000517039 122 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 AC133555.2-201ENST00000550213 292 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 MEG8-215ENST00000555354 469 ntTSL 3 BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 AL137100.2-201ENST00000555786 315 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 MIR6853-201ENST00000619642 74 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 AC007998.5-201ENST00000622938 237 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 AC008785.1-201ENST00000624475 456 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 U2.22-201ENST00000636441 106 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 U6.104-201ENST00000637979 90 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 DDX10P1-201ENST00000448545 1933 ntBASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZC3H4Q9UPT8 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 HSPA8P4-201ENST00000511877 1920 ntBASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 RNA5SP447-201ENST00000363749 119 ntBASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 AC097374.1-203ENST00000400783 485 ntBASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 RPS3AP12-201ENST00000443616 753 ntBASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 GAPDHP27-201ENST00000447427 1020 ntBASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 AL359073.1-201ENST00000448036 403 ntBASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 AL031274.1-201ENST00000450334 232 ntBASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 AC034236.1-201ENST00000469891 373 ntBASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 AC109327.1-201ENST00000471666 403 ntBASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 AC104576.1-201ENST00000524225 88 ntBASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 AL359219.2-201ENST00000555184 348 ntBASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 SUB1P3-201ENST00000564581 315 ntBASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 AC023575.1-201ENST00000580510 358 ntBASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 HMGN2P28-201ENST00000606102 262 ntBASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 AC002044.1-201ENST00000606707 158 ntBASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 MIR4272-201ENST00000635924 64 ntBASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 STK31-205ENST00000433467 3085 ntTSL 2 BASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 OR56B2P-202ENST00000641377 2453 ntBASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms