Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 RNU4-12P-201ENST00000365233 139 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
VPS4AQ9UN37 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS4AQ9UN37 SNORA20.2-201ENST00000383922 131 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 RNU6-837P-201ENST00000391056 108 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 SNORD115-47-201ENST00000391226 86 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AL590002.1-201ENST00000406554 418 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 MIR1277-201ENST00000408536 78 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 RNU4-78P-201ENST00000410940 126 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 MTND4LP11-201ENST00000422184 280 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 FCF1P1-201ENST00000432690 571 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS4AQ9UN37 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS4AQ9UN37 PPIAP15-201ENST00000479662 484 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AC023194.1-201ENST00000493084 308 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 RN7SL691P-201ENST00000494487 301 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.9□□□□□ -1.79
VPS4AQ9UN37 FAM92A1P2-202ENST00000504766 877 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AC010342.1-201ENST00000514047 877 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 SNORA70.14-201ENST00000516205 110 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 Y_RNA.693-201ENST00000516641 110 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AL512310.1-201ENST00000548639 172 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 RPS3AP4-201ENST00000555161 764 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AL133153.1-201ENST00000557756 303 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AC234778.2-201ENST00000566241 354 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 RPL23AP87-202ENST00000573039 466 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AC022655.2-201ENST00000577280 318 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 RN7SL703P-201ENST00000578485 302 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AC012417.1-201ENST00000582307 1039 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AC006254.3-201ENST00000603353 884 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AL161729.3-201ENST00000603533 673 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AC007038.2-201ENST00000608095 740 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AC004908.2-201ENST00000609090 574 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AL773545.4-201ENST00000637262 310 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AL513478.4-201ENST00000641636 310 ntBASIC3.9□□□□□ -1.79
VPS4AQ9UN37 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VPS4AQ9UN37 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.79
VPS4AQ9UN37 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
VPS4AQ9UN37 AL353746.1-201ENST00000566293 6881 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AC093908.1-201ENST00000623125 8092 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AC004520.1-201ENST00000608362 1413 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 RNU6-1155P-201ENST00000363554 107 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 RNU6-1097P-201ENST00000363586 107 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 RNU6-1078P-201ENST00000364522 103 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 RNU6-780P-201ENST00000391030 104 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 RNU11-4P-201ENST00000391149 133 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 RPS4XP8-201ENST00000402039 771 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 HMGN1P24-201ENST00000412282 298 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AL353193.1-201ENST00000421444 268 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 BEND7P1-201ENST00000422058 457 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AC007283.2-201ENST00000424739 197 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 DPPA2P1-201ENST00000428060 556 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AC119618.1-201ENST00000434191 222 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 RPL23AP20-201ENST00000447965 421 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AC108059.3-201ENST00000456388 214 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 HMGB3P30-201ENST00000457863 606 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 RNU7-59P-201ENST00000459101 61 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 RPL29P14-201ENST00000495837 428 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AC116353.2-201ENST00000505332 712 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 RNU6-1220P-201ENST00000517126 108 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 OR4R3P-201ENST00000525084 838 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AP000857.1-201ENST00000532151 543 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AC018630.1-201ENST00000541376 925 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AC007363.1-201ENST00000604736 620 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AC008277.2-201ENST00000605196 797 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AP002360.4-201ENST00000606980 481 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AC104458.1-201ENST00000608243 463 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AC093838.1-201ENST00000613014 469 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 U73479.1-201ENST00000618062 168 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AL713922.2-201ENST00000619384 716 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 MIR6130-201ENST00000619419 109 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms