Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 COPS8P3-201ENST00000526024 482 ntBASIC2.96□□□□□ -1.94
NOTCH3Q9UM47 AC025260.1-201ENST00000548858 430 ntBASIC2.96□□□□□ -1.94
NOTCH3Q9UM47 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC2.96□□□□□ -1.94
NOTCH3Q9UM47 AC099489.2-201ENST00000574976 260 ntBASIC2.96□□□□□ -1.94
NOTCH3Q9UM47 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.96□□□□□ -1.94
NOTCH3Q9UM47 MTCO2P22-201ENST00000603246 681 ntBASIC2.96□□□□□ -1.94
NOTCH3Q9UM47 AC080078.3-201ENST00000605407 463 ntBASIC2.96□□□□□ -1.94
NOTCH3Q9UM47 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.96□□□□□ -1.94
NOTCH3Q9UM47 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.96□□□□□ -1.94
NOTCH3Q9UM47 AC009161.2-201ENST00000624626 138 ntBASIC2.96□□□□□ -1.94
NOTCH3Q9UM47 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.96□□□□□ -1.94
NOTCH3Q9UM47 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC2.96□□□□□ -1.94
NOTCH3Q9UM47 SPATA2P1-201ENST00000431223 2055 ntBASIC2.96□□□□□ -1.94
NOTCH3Q9UM47 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 RNU6-1066P-201ENST00000363573 105 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 RNU6-379P-201ENST00000363813 104 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 Y_RNA.197-201ENST00000364004 102 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 RNU6-619P-201ENST00000365146 108 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 OR52E6-202ENST00000379946 954 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 SNORA69-201ENST00000383895 132 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 SNORD3H-201ENST00000384486 214 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 RPS4XP8-201ENST00000402039 771 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 MIR1302-3-201ENST00000408128 138 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 RNU2-3P-201ENST00000410144 191 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 CBX1P3-201ENST00000413296 527 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 AL513175.1-201ENST00000431492 780 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 ATP5JP1-201ENST00000431631 322 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 AL136380.1-201ENST00000447970 162 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 PSMC1P13-201ENST00000458195 985 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 AC006390.1-201ENST00000508068 283 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 RN7SKP18-201ENST00000516005 275 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 RNU6-406P-201ENST00000516470 107 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 AP002812.4-201ENST00000532139 286 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 AL117187.1-201ENST00000555482 181 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 AL080274.1-201ENST00000605565 220 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 AL031666.3-201ENST00000609320 1006 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 MIR7154-201ENST00000620673 73 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 AP001284.1-201ENST00000528393 2118 ntBASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NOTCH3Q9UM47 Y_RNA.135-201ENST00000363439 95 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 MIR217-201ENST00000384817 110 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 MIR548M-201ENST00000408260 86 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 RPL7AP73-201ENST00000413490 353 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 SDAD1P3-201ENST00000427380 333 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 ISCA1P6-201ENST00000427740 390 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 HMGB1P37-201ENST00000439613 609 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 GEMIN8P3-201ENST00000445417 720 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 RPS4XP10-201ENST00000465034 731 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AC010307.1-201ENST00000467206 836 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AC083798.1-201ENST00000472671 131 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AL049873.1-201ENST00000480540 376 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AC108078.3-201ENST00000502633 489 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 RNU6-559P-201ENST00000516151 98 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AP003122.3-201ENST00000526316 255 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 OR5B19P-201ENST00000531766 928 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 MIR3167-201ENST00000579623 85 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 YPEL5P2-201ENST00000605553 359 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 RNU6-87P-201ENST00000607561 108 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AC063952.1-203ENST00000634410 658 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms