Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC087373.1-201ENST00000524920 491 ntBASIC1.96□□□□□ -2.1
SCN11AQ9UI33 AL157834.3-201ENST00000615543 103 ntBASIC1.96□□□□□ -2.1
SCN11AQ9UI33 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.96□□□□□ -2.1
SCN11AQ9UI33 BX649567.1-201ENST00000642071 1134 ntBASIC1.96□□□□□ -2.1
SCN11AQ9UI33 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
SCN11AQ9UI33 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
SCN11AQ9UI33 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SCN11AQ9UI33 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.95□□□□□ -2.1
SCN11AQ9UI33 MORF4L1P7-201ENST00000426038 703 ntBASIC1.95□□□□□ -2.1
SCN11AQ9UI33 HMGB1P45-201ENST00000435986 653 ntBASIC1.95□□□□□ -2.1
SCN11AQ9UI33 RPS26P56-201ENST00000444468 240 ntBASIC1.95□□□□□ -2.1
SCN11AQ9UI33 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.95□□□□□ -2.1
SCN11AQ9UI33 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.95□□□□□ -2.1
SCN11AQ9UI33 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.95□□□□□ -2.1
SCN11AQ9UI33 AC012493.3-201ENST00000604494 112 ntBASIC1.95□□□□□ -2.1
SCN11AQ9UI33 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.95□□□□□ -2.1
SCN11AQ9UI33 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
SCN11AQ9UI33 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SCN11AQ9UI33 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SCN11AQ9UI33 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.95□□□□□ -2.1
SCN11AQ9UI33 RNU6-356P-201ENST00000384140 107 ntBASIC1.95□□□□□ -2.1
SCN11AQ9UI33 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.95□□□□□ -2.1
SCN11AQ9UI33 AC006390.1-201ENST00000508068 283 ntBASIC1.95□□□□□ -2.1
SCN11AQ9UI33 RNU1-61P-201ENST00000516107 151 ntBASIC1.95□□□□□ -2.1
SCN11AQ9UI33 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.95□□□□□ -2.1
SCN11AQ9UI33 OR6C73P-201ENST00000546432 358 ntBASIC1.95□□□□□ -2.1
SCN11AQ9UI33 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.95□□□□□ -2.1
SCN11AQ9UI33 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
SCN11AQ9UI33 SNORA67.1-201ENST00000364749 141 ntBASIC1.94□□□□□ -2.1
SCN11AQ9UI33 CD24P4-201ENST00000382840 243 ntBASIC1.94□□□□□ -2.1
SCN11AQ9UI33 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.94□□□□□ -2.1
SCN11AQ9UI33 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.94□□□□□ -2.1
SCN11AQ9UI33 RPL12P25-201ENST00000455592 494 ntBASIC1.94□□□□□ -2.1
SCN11AQ9UI33 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.94□□□□□ -2.1
SCN11AQ9UI33 OR4V1P-201ENST00000525394 1140 ntBASIC1.94□□□□□ -2.1
SCN11AQ9UI33 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.94□□□□□ -2.1
SCN11AQ9UI33 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.94□□□□□ -2.1
SCN11AQ9UI33 AL133507.1-201ENST00000605269 557 ntBASIC1.94□□□□□ -2.1
SCN11AQ9UI33 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC1.94□□□□□ -2.1
SCN11AQ9UI33 AC006065.5-201ENST00000623427 349 ntBASIC1.94□□□□□ -2.1
SCN11AQ9UI33 RNU6-799P-201ENST00000363567 107 ntBASIC1.93□□□□□ -2.1
SCN11AQ9UI33 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.93□□□□□ -2.1
SCN11AQ9UI33 HMGN2P30-201ENST00000423237 256 ntBASIC1.93□□□□□ -2.1
SCN11AQ9UI33 RPS29P29-201ENST00000456396 171 ntBASIC1.93□□□□□ -2.1
SCN11AQ9UI33 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.93□□□□□ -2.1
SCN11AQ9UI33 RNA5SP220-201ENST00000516298 104 ntBASIC1.93□□□□□ -2.1
SCN11AQ9UI33 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.93□□□□□ -2.1
SCN11AQ9UI33 AC010928.2-201ENST00000588017 287 ntBASIC1.93□□□□□ -2.1
SCN11AQ9UI33 AC068944.2-201ENST00000610373 403 ntBASIC1.93□□□□□ -2.1
SCN11AQ9UI33 AC006026.1-201ENST00000444025 1803 ntBASIC1.93□□□□□ -2.1
SCN11AQ9UI33 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.93□□□□□ -2.1
SCN11AQ9UI33 RNU6-225P-201ENST00000384613 103 ntBASIC1.93□□□□□ -2.1
SCN11AQ9UI33 RNU2-25P-201ENST00000411041 191 ntBASIC1.93□□□□□ -2.1
SCN11AQ9UI33 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
SCN11AQ9UI33 AC092991.1-201ENST00000477176 376 ntBASIC1.93□□□□□ -2.1
SCN11AQ9UI33 AC034244.1-201ENST00000507687 207 ntBASIC1.93□□□□□ -2.1
SCN11AQ9UI33 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN11AQ9UI33 AL161734.1-201ENST00000609720 557 ntBASIC1.93□□□□□ -2.1
SCN11AQ9UI33 AC005296.1-201ENST00000616145 209 ntBASIC1.93□□□□□ -2.1
SCN11AQ9UI33 ZNF734P-201ENST00000419494 1534 ntBASIC1.92□□□□□ -2.1
SCN11AQ9UI33 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SCN11AQ9UI33 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SCN11AQ9UI33 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.92□□□□□ -2.1
SCN11AQ9UI33 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SCN11AQ9UI33 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SCN11AQ9UI33 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.92□□□□□ -2.1
SCN11AQ9UI33 AL354695.1-201ENST00000427935 228 ntBASIC1.92□□□□□ -2.1
SCN11AQ9UI33 GTF2IP7-202ENST00000436677 309 ntBASIC1.92□□□□□ -2.1
SCN11AQ9UI33 AC244505.5-201ENST00000443639 207 ntBASIC1.92□□□□□ -2.1
SCN11AQ9UI33 MTATP6P22-201ENST00000507369 598 ntBASIC1.92□□□□□ -2.1
SCN11AQ9UI33 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN11AQ9UI33 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.92□□□□□ -2.1
SCN11AQ9UI33 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.92□□□□□ -2.1
SCN11AQ9UI33 AC011477.1-204ENST00000623416 1325 ntBASIC1.91□□□□□ -2.1
SCN11AQ9UI33 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SCN11AQ9UI33 RNU6-600P-201ENST00000362524 99 ntBASIC1.91□□□□□ -2.1
SCN11AQ9UI33 RNY1-201ENST00000364228 113 ntBASIC1.91□□□□□ -2.1
SCN11AQ9UI33 RNU6-1027P-201ENST00000383998 107 ntBASIC1.91□□□□□ -2.1
SCN11AQ9UI33 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SCN11AQ9UI33 AL136133.1-201ENST00000413694 376 ntBASIC1.91□□□□□ -2.1
SCN11AQ9UI33 Z99714.1-201ENST00000450463 807 ntBASIC1.91□□□□□ -2.1
SCN11AQ9UI33 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.91□□□□□ -2.1
SCN11AQ9UI33 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.91□□□□□ -2.1
SCN11AQ9UI33 SNORA31.24-201ENST00000517232 57 ntBASIC1.91□□□□□ -2.1
SCN11AQ9UI33 OR4R1P-201ENST00000529879 463 ntBASIC1.91□□□□□ -2.1
SCN11AQ9UI33 AC135279.1-201ENST00000543493 504 ntBASIC1.91□□□□□ -2.1
SCN11AQ9UI33 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.91□□□□□ -2.1
SCN11AQ9UI33 AC009220.3-201ENST00000604318 586 ntBASIC1.91□□□□□ -2.1
SCN11AQ9UI33 RNU2-40P-201ENST00000410833 196 ntBASIC1.9□□□□□ -2.1
SCN11AQ9UI33 AC096533.1-201ENST00000411645 353 ntBASIC1.9□□□□□ -2.1
SCN11AQ9UI33 AL353898.1-201ENST00000444055 238 ntBASIC1.9□□□□□ -2.1
SCN11AQ9UI33 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
SCN11AQ9UI33 AC011604.1-201ENST00000545978 196 ntBASIC1.9□□□□□ -2.1
SCN11AQ9UI33 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.9□□□□□ -2.1
SCN11AQ9UI33 AC135776.4-201ENST00000624300 1904 ntBASIC1.9□□□□□ -2.1
SCN11AQ9UI33 AC138915.1-201ENST00000565427 1685 ntBASIC1.9□□□□□ -2.11
SCN11AQ9UI33 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SCN11AQ9UI33 RNU6-1-201ENST00000383898 107 ntBASIC1.9□□□□□ -2.11
SCN11AQ9UI33 RNU6-42P-201ENST00000384165 107 ntBASIC1.9□□□□□ -2.11
SCN11AQ9UI33 RNU6-36P-201ENST00000384172 107 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms