Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TREX1Q9NSU2 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
TREX1Q9NSU2 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 RNU5B-4P-201ENST00000363508 111 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 SET-203ENST00000372688 801 ntTSL 2 BASIC2.44□□□□□ -2.02
TREX1Q9NSU2 AL359511.1-201ENST00000402970 211 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 AC019178.2-201ENST00000423595 505 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TREX1Q9NSU2 AC092634.2-201ENST00000428146 1010 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 FCF1P1-201ENST00000432690 571 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 AC024082.2-201ENST00000434771 238 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.44□□□□□ -2.02
TREX1Q9NSU2 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.44□□□□□ -2.02
TREX1Q9NSU2 AL121871.1-201ENST00000443413 436 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TREX1Q9NSU2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TREX1Q9NSU2 RPL23AP45-201ENST00000476406 468 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 RPL31P60-201ENST00000478450 367 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 KC877373.1-201ENST00000479066 408 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.44□□□□□ -2.02
TREX1Q9NSU2 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.44□□□□□ -2.02
TREX1Q9NSU2 MTND2P31-201ENST00000512602 616 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.44□□□□□ -2.02
TREX1Q9NSU2 AC104417.1-201ENST00000523974 751 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TREX1Q9NSU2 SETP7-201ENST00000552169 453 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.44□□□□□ -2.02
TREX1Q9NSU2 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.44□□□□□ -2.02
TREX1Q9NSU2 AC138915.2-201ENST00000569776 97 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 RPL23AP84-201ENST00000571193 464 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 OR4K8P-201ENST00000578842 1048 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 AC061975.8-201ENST00000587058 721 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 BNIP3P24-201ENST00000593398 557 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 NRBF2P5-201ENST00000603087 788 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 AC013444.2-201ENST00000603317 787 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 AC097504.2-201ENST00000608088 454 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 AL592148.2-201ENST00000612210 372 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 AC008759.3-201ENST00000613300 508 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.44□□□□□ -2.02
TREX1Q9NSU2 SCARNA15.3-201ENST00000626315 122 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 SCARNA4.1-201ENST00000628597 123 ntBASIC2.44□□□□□ -2.02
TREX1Q9NSU2 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.44□□□□□ -2.02
TREX1Q9NSU2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.44□□□□□ -2.02
TREX1Q9NSU2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.43□□□□□ -2.02
TREX1Q9NSU2 AC093536.2-201ENST00000565257 1406 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.43□□□□□ -2.02
TREX1Q9NSU2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
TREX1Q9NSU2 MIR21-201ENST00000362134 72 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 RNA5SP68-201ENST00000363885 119 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 RNU6-198P-201ENST00000384258 104 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 TAS2R15P-201ENST00000390674 928 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 RNA5SP181-201ENST00000410246 98 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.43□□□□□ -2.02
TREX1Q9NSU2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.43□□□□□ -2.02
TREX1Q9NSU2 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 AC234781.2-201ENST00000426370 994 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 OR4K11P-201ENST00000431829 904 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 AC092573.2-201ENST00000434546 243 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 AC009296.1-201ENST00000443146 155 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 AL592447.1-201ENST00000447592 540 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 PNPLA4P1-201ENST00000458328 305 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 AC104164.3-201ENST00000467363 1258 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 AC004924.1-201ENST00000480160 781 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 AC023424.2-201ENST00000493479 777 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.43□□□□□ -2.02
TREX1Q9NSU2 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.43□□□□□ -2.02
TREX1Q9NSU2 MTCO3P27-201ENST00000514397 196 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 RNU4-29P-201ENST00000515943 174 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 SNORA31.15-201ENST00000516771 132 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 RNU1-104P-201ENST00000517280 175 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 AP003467.2-201ENST00000520175 319 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.43□□□□□ -2.02
TREX1Q9NSU2 MIR4446-201ENST00000578505 67 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.43□□□□□ -2.02
TREX1Q9NSU2 TPMTP1-201ENST00000592307 737 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 AL158211.2-201ENST00000607282 395 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 AC067747.1-201ENST00000608026 250 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 MIR6817-201ENST00000615588 66 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
TREX1Q9NSU2 AC008568.2-201ENST00000623862 2313 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
TREX1Q9NSU2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TREX1Q9NSU2 AC131280.1-202ENST00000624067 4211 ntBASIC2.43□□□□□ -2.02
TREX1Q9NSU2 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TREX1Q9NSU2 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
TREX1Q9NSU2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TREX1Q9NSU2 Y_RNA.25-201ENST00000362528 102 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 SNORA63.3-201ENST00000362682 132 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 MIR196B-201ENST00000384852 84 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 MIR135A2-201ENST00000384854 100 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.42□□□□□ -2.02
TREX1Q9NSU2 BEND7P1-201ENST00000422058 457 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.42□□□□□ -2.02
TREX1Q9NSU2 AL831737.1-201ENST00000441288 271 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.42□□□□□ -2.02
TREX1Q9NSU2 AC017099.1-201ENST00000448261 1028 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 AC005297.2-201ENST00000450430 606 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 USP9YP34-201ENST00000453983 808 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 RN7SL432P-201ENST00000484057 298 ntBASIC2.42□□□□□ -2.02
TREX1Q9NSU2 RPS27P26-201ENST00000494583 239 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms