Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 MTND5P17-201ENST00000418405 1603 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
VTA1Q9NP79 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VTA1Q9NP79 CKAP2P1-201ENST00000555477 2049 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.52□□□□□ -1.69
VTA1Q9NP79 AC067945.1-201ENST00000342609 618 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 RNU1-108P-201ENST00000362556 161 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 SNORA71.3-201ENST00000362582 128 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 RNA5SP124-201ENST00000362739 110 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 RNU6-960P-201ENST00000364056 120 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 RNU6-534P-201ENST00000364877 106 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 RNU4-48P-201ENST00000365559 182 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VTA1Q9NP79 MIR30B-201ENST00000384850 88 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 RNU6-882P-201ENST00000391025 103 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 AL136372.1-201ENST00000403060 228 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.52□□□□□ -1.69
VTA1Q9NP79 RN7SKP156-201ENST00000410308 342 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 RNA5SP118-201ENST00000410385 109 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 SNORA57.3-201ENST00000411095 141 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 RPL21P24-201ENST00000413752 448 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 OR51A5P-201ENST00000415429 942 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.52□□□□□ -1.69
VTA1Q9NP79 AL353193.1-201ENST00000421444 268 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.52□□□□□ -1.69
VTA1Q9NP79 AC006946.1-201ENST00000429106 328 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 GOT2P5-201ENST00000433995 546 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 AC090774.1-201ENST00000435925 246 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 AC004866.2-201ENST00000438285 481 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 RPL7P54-201ENST00000438336 674 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 MTCO3P45-201ENST00000443036 613 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 DPPA3P1-201ENST00000448050 469 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 AC006480.1-201ENST00000449887 378 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.52□□□□□ -1.69
VTA1Q9NP79 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.52□□□□□ -1.69
VTA1Q9NP79 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.52□□□□□ -1.69
VTA1Q9NP79 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.52□□□□□ -1.69
VTA1Q9NP79 RN7SL323P-201ENST00000494712 295 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.52□□□□□ -1.69
VTA1Q9NP79 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.52□□□□□ -1.69
VTA1Q9NP79 TRMT10BP1-201ENST00000519377 943 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 FAM60DP-201ENST00000524174 632 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 MTND1P35-201ENST00000526739 508 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 AC100770.1-201ENST00000532310 322 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 YPEL5P3-201ENST00000547227 352 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 MIR4293-201ENST00000584305 78 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 AC006116.10-201ENST00000591836 581 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 AC064801.1-201ENST00000612025 407 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.52□□□□□ -1.69
VTA1Q9NP79 TAB3P1-202ENST00000452645 1634 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 EXOC5P1-201ENST00000510543 1969 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 AC116096.1-201ENST00000566804 2314 ntBASIC4.52□□□□□ -1.69
VTA1Q9NP79 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VTA1Q9NP79 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VTA1Q9NP79 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.52□□□□□ -1.69
VTA1Q9NP79 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.51□□□□□ -1.69
VTA1Q9NP79 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.51□□□□□ -1.69
VTA1Q9NP79 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VTA1Q9NP79 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.51□□□□□ -1.69
VTA1Q9NP79 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VTA1Q9NP79 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
VTA1Q9NP79 ZNF680P1-201ENST00000436625 1469 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.51□□□□□ -1.69
VTA1Q9NP79 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VTA1Q9NP79 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
VTA1Q9NP79 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.51□□□□□ -1.69
VTA1Q9NP79 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VTA1Q9NP79 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VTA1Q9NP79 Y_RNA.295-201ENST00000364918 102 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 MIR454-201ENST00000390180 115 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 RNU2-39P-201ENST00000410604 198 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 RPL7AP73-201ENST00000413490 353 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 UBE2FP1-201ENST00000416536 447 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.51□□□□□ -1.69
VTA1Q9NP79 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
VTA1Q9NP79 AL162388.1-201ENST00000450912 352 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 MTND3P10-201ENST00000450967 341 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.51□□□□□ -1.69
VTA1Q9NP79 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.51□□□□□ -1.69
VTA1Q9NP79 snoU13.22-201ENST00000459428 104 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.51□□□□□ -1.69
VTA1Q9NP79 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.51□□□□□ -1.69
VTA1Q9NP79 HSPD1P15-201ENST00000505573 1122 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 AC117522.1-201ENST00000509821 380 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 AC074344.1-201ENST00000512823 224 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 AC114797.1-201ENST00000514003 728 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 RNA5SP179-201ENST00000517284 121 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.51□□□□□ -1.69
VTA1Q9NP79 DEFB109D-201ENST00000529497 240 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 NCAPGP2-201ENST00000557911 754 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.51□□□□□ -1.69
VTA1Q9NP79 AC091167.4-201ENST00000605079 184 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 Z84480.1-201ENST00000605131 311 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 SNORA51-201ENST00000606420 132 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 AL450472.3-201ENST00000615578 367 ntBASIC4.51□□□□□ -1.69
VTA1Q9NP79 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.51□□□□□ -1.69
VTA1Q9NP79 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VTA1Q9NP79 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.51□□□□□ -1.69
VTA1Q9NP79 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms