Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 MIR3667-201ENST00000581025 74 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 AL354984.3-201ENST00000604803 325 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 AC006157.1-201ENST00000611750 366 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 AL138726.1-201ENST00000614873 333 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 AC103705.1-201ENST00000619013 241 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 Z69720.2-201ENST00000624755 279 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.21□□□□□ -1.73
SEC61A2Q9H9S3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SEC61A2Q9H9S3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SEC61A2Q9H9S3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
SEC61A2Q9H9S3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.21□□□□□ -1.73
SEC61A2Q9H9S3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
SEC61A2Q9H9S3 AL672167.1-203ENST00000641299 2975 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 Y_RNA.135-201ENST00000363439 95 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 RNA5SP28-201ENST00000363841 119 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 RNA5SP87-201ENST00000384155 118 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 RNU6-784P-201ENST00000384330 106 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 RNU6-1127P-201ENST00000384580 107 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 RNU6-1222P-201ENST00000384615 107 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 MIR1302-3-201ENST00000408128 138 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 BX682237.1-201ENST00000415016 335 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 AL589765.3-201ENST00000446084 462 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 OR1H1P-201ENST00000448731 937 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 AL162388.1-201ENST00000450912 352 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 SNORD97-201ENST00000459187 142 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 RPL23AP55-201ENST00000498163 452 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 AC097473.1-201ENST00000508142 408 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 SNORA25.10-201ENST00000515926 124 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 RNU1-6P-201ENST00000516290 144 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 DEFB108D-201ENST00000527787 222 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 FKBP1BP1-201ENST00000553366 325 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 EDDM3DP-201ENST00000554692 434 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 AC106782.4-201ENST00000568264 210 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 MIR4737-201ENST00000583979 81 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 AC008162.1-201ENST00000604718 254 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 AL670379.4-201ENST00000605279 254 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 AC010378.1-201ENST00000619270 362 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 AL589994.2-201ENST00000621124 579 ntBASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SEC61A2Q9H9S3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 OR14L1P-202ENST00000641545 3009 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 GABPAP-201ENST00000419271 1356 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 RNU6-960P-201ENST00000364056 120 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 RNU6-702P-201ENST00000364982 107 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 RNU4-25P-201ENST00000410569 230 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 AL645608.4-201ENST00000423619 154 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 AC096644.2-201ENST00000429278 159 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 RPL36AP6-201ENST00000435770 321 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 AC006466.1-201ENST00000438721 289 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 AC005008.1-201ENST00000456151 612 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 DEFB109F-201ENST00000491870 277 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 AC079140.5-201ENST00000507882 310 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 RNU6-1271P-201ENST00000517049 105 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 GSTP1P1-201ENST00000548078 319 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 DYNLL1P4-201ENST00000549314 266 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 AL161670.1-201ENST00000554348 137 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 RPL23AP84-201ENST00000571193 464 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 MIR5699-201ENST00000578903 90 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms