Protein–RNA interactions for Protein: Q9GZZ0

HOXD1, Homeobox protein Hox-D1, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1Q9GZZ0 AC004832.5-201ENST00000608677 401 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 SNORD39.4-201ENST00000620099 78 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 AC084035.1-201ENST00000634543 607 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 MTND4P4-201ENST00000439033 1366 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 AC092125.1-201ENST00000562568 1995 ntBASIC3.11□□□□□ -1.91
HOXD1Q9GZZ0 AL390237.1-201ENST00000404226 1415 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 RPL7P26-201ENST00000333817 754 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 RNU5E-5P-201ENST00000365379 116 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 RNU6-533P-201ENST00000384144 107 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 RNY3P10-201ENST00000384764 102 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AL138880.1-201ENST00000405824 642 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 CCNG1P1-201ENST00000406783 885 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AL359704.1-201ENST00000411586 781 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 RPL17P12-201ENST00000413391 526 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 RPS7P15-201ENST00000415804 584 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AC079780.1-201ENST00000428259 207 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AC091286.1-201ENST00000431233 461 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 MTND1P28-201ENST00000435623 950 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AC122718.1-201ENST00000439448 744 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AC112653.1-201ENST00000443851 386 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 FAM133DP-201ENST00000464802 691 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 SNORA31.20-201ENST00000517111 133 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 MTCYBP41-201ENST00000528913 1123 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 UBE2L4-201ENST00000587688 464 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AC010928.3-201ENST00000587712 541 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AC067852.3-201ENST00000589177 561 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 TPMTP1-201ENST00000592307 737 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AC064807.4-201ENST00000607201 407 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AC104010.1-201ENST00000616889 150 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AL161637.1-201ENST00000622380 412 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 AL158801.5-201ENST00000623123 465 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 MTND5P19-201ENST00000424872 1794 ntBASIC3.1□□□□□ -1.91
HOXD1Q9GZZ0 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 RNU6-114P-201ENST00000384704 105 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 SAR1AP2-201ENST00000392696 594 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 RPL5P18-201ENST00000406671 891 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 RAD23BP2-201ENST00000416003 1207 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 SSXP9-201ENST00000417503 292 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AL356583.2-201ENST00000426536 280 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 HMGN2P31-201ENST00000432430 273 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 MTCO1P19-201ENST00000443487 500 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 NPM1P49-201ENST00000448027 714 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 MTND1P29-201ENST00000448112 647 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AL590365.1-201ENST00000450788 243 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AC010285.1-201ENST00000470580 392 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AC012181.1-201ENST00000479895 423 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 MIR4474-201ENST00000579189 78 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 uc_338.1-201ENST00000612113 180 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AC025594.3-201ENST00000613068 790 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AL355365.1-201ENST00000616480 294 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AC079597.1-201ENST00000624306 508 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AC090582.1-201ENST00000636321 199 ntBASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXD1Q9GZZ0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HOXD1Q9GZZ0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms