Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 TIMM9P2-201ENST00000419324 266 ntBASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 AL645937.1-202ENST00000421799 937 ntBASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 SAR1AP4-201ENST00000429225 591 ntBASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 RPL18AP17-201ENST00000455326 198 ntBASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 RPS29P12-201ENST00000460178 152 ntBASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 RPL23AP11-201ENST00000475260 469 ntBASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 AC103975.1-201ENST00000482506 483 ntBASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 RPL30P5-201ENST00000494923 336 ntBASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 AC114322.1-201ENST00000506771 926 ntBASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 XKRY-201ENST00000510392 1100 ntBASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 OR7K1P-201ENST00000546439 926 ntBASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 CYCSP39-201ENST00000565821 309 ntBASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 MTCO2P2-201ENST00000591258 225 ntBASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 RNU4-5P-201ENST00000607255 135 ntBASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 AP000676.4-201ENST00000624659 623 ntBASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 SDAD1P2-201ENST00000441308 2028 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 AC091564.4-201ENST00000533934 2194 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 ZNF29P-201ENST00000225587 168 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 Y_RNA.472-201ENST00000384322 102 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 DHFRP6-201ENST00000401776 268 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 NANOGP5-201ENST00000424456 877 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 AC104332.2-201ENST00000429959 156 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 AC007327.1-201ENST00000447461 264 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 SETP11-201ENST00000473027 690 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 AC096576.1-201ENST00000489014 359 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 RNA5SP76-201ENST00000516277 87 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 RNU6-56P-201ENST00000516986 93 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 MTND2P32-201ENST00000521584 1038 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 AL132857.1-201ENST00000555180 708 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 HMGB1P14-201ENST00000557424 591 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 AC010653.1-201ENST00000571108 881 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 MTND3P13-201ENST00000574391 343 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 AL391001.1-201ENST00000602747 715 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 AL390208.1-201ENST00000605885 644 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 AC069234.5-201ENST00000611056 416 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 AC027309.3-201ENST00000623419 351 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 CR381653.2-201ENST00000624041 768 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 AC006386.2-201ENST00000624491 75 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 AC012005.1-201ENST00000624575 75 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.1□□□□□ -1.91
CCSER1Q9C0I3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 NACA3P-201ENST00000359690 648 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 RNU5A-1-201ENST00000362698 116 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 RNU6-560P-201ENST00000364007 108 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 RNU6-413P-201ENST00000384115 107 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 MIR634-201ENST00000385208 97 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 RNA5SP252-201ENST00000391131 119 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 U3.26-201ENST00000391236 204 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 AL122016.1-201ENST00000403365 367 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 AL136310.1-201ENST00000404926 654 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 TPMTP2-201ENST00000414372 726 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 RPS3AP37-201ENST00000419176 745 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 ATG3P1-201ENST00000419507 911 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 AC092648.1-201ENST00000425870 423 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 AL390023.1-201ENST00000428836 262 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 USP9YP24-201ENST00000434374 697 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 AC112220.1-201ENST00000434628 355 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 RPL23AP58-201ENST00000440453 469 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 USP9YP17-201ENST00000444617 696 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 AC097493.1-201ENST00000463958 372 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 AL049873.1-201ENST00000480540 376 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 AC134050.1-201ENST00000495088 933 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 AC006445.2-201ENST00000510061 472 ntBASIC3.09□□□□□ -1.91
CCSER1Q9C0I3 AC026801.2-201ENST00000515352 425 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms