Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 AC090772.4-201ENST00000623599 362 ntBASIC2.07□□□□□ -2.08
SHANK2-AS3Q9BTD1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SHANK2-AS3Q9BTD1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SHANK2-AS3Q9BTD1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
SHANK2-AS3Q9BTD1 CDR1-202ENST00000625883 1485 ntBASIC2.07□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC010680.1-201ENST00000590024 3590 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 NACA3P-201ENST00000359690 648 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 RNA5SP139-201ENST00000364340 117 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 RNU6-343P-201ENST00000364709 104 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 RNU1-100P-201ENST00000365255 165 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 RNU6-925P-201ENST00000384629 104 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 Y_RNA.548-201ENST00000384656 105 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 MIR23A-201ENST00000385245 73 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 MIR670-201ENST00000390142 98 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 SNRPEP2-201ENST00000397592 279 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AL138827.1-201ENST00000402666 306 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 HMGB1P17-201ENST00000403495 628 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AL590084.1-201ENST00000407885 387 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 EEF1A1P41-201ENST00000414667 207 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC106883.1-201ENST00000418805 562 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 RPL26P6-201ENST00000440913 438 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AL592447.1-201ENST00000447592 540 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 ZNF886P-201ENST00000450781 723 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 BX510359.1-201ENST00000456973 237 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AL049714.1-201ENST00000466686 347 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 RPS29P26-201ENST00000477483 171 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC090525.1-201ENST00000479116 478 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 RPL30P5-201ENST00000494923 336 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 SLC25A15P5-201ENST00000508033 253 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 RAC1P5-201ENST00000512182 576 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 RNY4P37-201ENST00000516225 96 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC004486.1-201ENST00000546846 233 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC007954.1-201ENST00000554198 494 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC023813.2-201ENST00000564321 469 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 ACTR3BP3-201ENST00000565577 979 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 MIR4635-201ENST00000583759 79 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 U73023.1-201ENST00000603134 700 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 RPP40P2-201ENST00000603596 712 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 DUXAP11-201ENST00000603858 526 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC106052.1-201ENST00000608029 497 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 ATP5A1P2-202ENST00000616464 443 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC006386.1-201ENST00000619436 415 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC002064.3-201ENST00000623448 346 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC099654.7-201ENST00000635788 2127 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC097714.1-201ENST00000511272 1647 ntBASIC2.06□□□□□ -2.08
SHANK2-AS3Q9BTD1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 ZNF29P-201ENST00000225587 168 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 FRG1BP-201ENST00000278882 761 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 RNU1-140P-201ENST00000365040 165 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 DEFA7P-201ENST00000382676 285 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 RNU6-413P-201ENST00000384115 107 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 RNA5SP21-201ENST00000410917 96 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 RPL35AP12-201ENST00000425362 338 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 AL139132.1-201ENST00000431587 344 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 AL671855.1-201ENST00000446875 1203 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 OFD1P3Y-201ENST00000453312 783 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 AP000705.1-201ENST00000454567 350 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC027673.1-201ENST00000456245 405 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC126182.1-201ENST00000478134 357 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 SRIP1-201ENST00000489235 288 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC023424.2-201ENST00000493479 777 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 TBCAP3-201ENST00000512475 312 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC022483.1-201ENST00000514020 567 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 RNU6-583P-201ENST00000516012 92 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 RNA5SP341-201ENST00000516261 117 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 RNU6-798P-201ENST00000516912 103 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC100870.1-201ENST00000522035 505 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC123904.3-201ENST00000547218 814 ntBASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.05□□□□□ -2.08
SHANK2-AS3Q9BTD1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms