Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC2.82□□□□□ -1.96
LITAFQ99732 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
LITAFQ99732 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.81□□□□□ -1.96
LITAFQ99732 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LITAFQ99732 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.81□□□□□ -1.96
LITAFQ99732 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LITAFQ99732 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
LITAFQ99732 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
LITAFQ99732 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.81□□□□□ -1.96
LITAFQ99732 LINC02471-203ENST00000641941 4752 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC2.81□□□□□ -1.96
LITAFQ99732 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC2.81□□□□□ -1.96
LITAFQ99732 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
LITAFQ99732 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LITAFQ99732 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LITAFQ99732 Y_RNA.100-201ENST00000363141 102 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 RNU6-522P-201ENST00000364497 107 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.81□□□□□ -1.96
LITAFQ99732 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC2.81□□□□□ -1.96
LITAFQ99732 RNU6-1074P-201ENST00000383995 104 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 RNU6-76P-201ENST00000384060 104 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 RNU6-629P-201ENST00000384061 103 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 RNU6-1011P-201ENST00000384668 107 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 MIR3074-201ENST00000384885 81 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LITAFQ99732 NDUFS5P1-201ENST00000405668 289 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 NDUFB4P5-201ENST00000415445 361 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.81□□□□□ -1.96
LITAFQ99732 AC119751.6-201ENST00000416712 186 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.81□□□□□ -1.96
LITAFQ99732 AC244098.2-201ENST00000422068 99 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC2.81□□□□□ -1.96
LITAFQ99732 RPL7P46-201ENST00000425129 740 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 RWDD4P2-201ENST00000426392 563 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 AC016831.4-201ENST00000438302 307 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 AL359073.1-201ENST00000448036 403 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 RPL31P15-201ENST00000449770 338 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.81□□□□□ -1.96
LITAFQ99732 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.81□□□□□ -1.96
LITAFQ99732 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.81□□□□□ -1.96
LITAFQ99732 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.81□□□□□ -1.96
LITAFQ99732 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.81□□□□□ -1.96
LITAFQ99732 RNU6-329P-201ENST00000459618 107 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 RPL7AP6-201ENST00000477943 801 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC2.81□□□□□ -1.96
LITAFQ99732 VN1R105P-201ENST00000486595 910 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 RN7SL812P-201ENST00000493791 279 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 AC106872.2-201ENST00000494303 480 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 AC117522.3-201ENST00000507974 584 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 RBBP4P6-201ENST00000508098 202 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 AC098591.2-201ENST00000510152 315 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.81□□□□□ -1.96
LITAFQ99732 RPL7P20-201ENST00000520308 745 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 MTND4P7-201ENST00000523876 130 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 AP006587.4-201ENST00000526053 529 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 AC109635.4-202ENST00000531666 412 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC2.81□□□□□ -1.96
LITAFQ99732 AP001880.2-201ENST00000538233 448 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.81□□□□□ -1.96
LITAFQ99732 AC093027.1-201ENST00000546698 429 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
LITAFQ99732 SCOCP1-201ENST00000554676 349 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.81□□□□□ -1.96
LITAFQ99732 AL118558.2-201ENST00000556294 238 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC2.81□□□□□ -1.96
LITAFQ99732 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.81□□□□□ -1.96
LITAFQ99732 MIR5583-1-201ENST00000580941 59 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC2.81□□□□□ -1.96
LITAFQ99732 AC008521.1-201ENST00000587471 187 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 AC006116.10-201ENST00000591836 581 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.81□□□□□ -1.96
LITAFQ99732 AC044792.1-201ENST00000593294 196 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 AC104662.1-201ENST00000604448 511 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 AL512329.2-201ENST00000607350 548 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 AC135507.2-201ENST00000612443 309 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 AL390240.1-201ENST00000612950 384 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 EIF3FP1-201ENST00000613970 806 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC2.81□□□□□ -1.96
LITAFQ99732 MIR6071-201ENST00000616741 78 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC2.81□□□□□ -1.96
LITAFQ99732 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
LITAFQ99732 AC015967.1-201ENST00000619893 476 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.81□□□□□ -1.96
LITAFQ99732 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.81□□□□□ -1.96
LITAFQ99732 TPTEP1-208ENST00000636884 213 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LITAFQ99732 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LITAFQ99732 AC027290.2-201ENST00000623210 18662 ntBASIC2.81□□□□□ -1.96
LITAFQ99732 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
LITAFQ99732 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
LITAFQ99732 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LITAFQ99732 AC010300.1-201ENST00000600671 5134 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
LITAFQ99732 AC103710.2-202ENST00000641454 2853 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.8□□□□□ -1.96
LITAFQ99732 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
LITAFQ99732 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LITAFQ99732 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
LITAFQ99732 TPTE2P4-201ENST00000258589 1605 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms