Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.29□□□□□ -1.88
CDCA3Q99618 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.29□□□□□ -1.88
CDCA3Q99618 MTCYBP22-201ENST00000603788 447 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 AL590099.1-201ENST00000615276 138 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 AC007494.3-201ENST00000624660 743 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDCA3Q99618 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDCA3Q99618 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDCA3Q99618 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.29□□□□□ -1.88
CDCA3Q99618 AC004925.1-201ENST00000624256 2706 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDCA3Q99618 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.28□□□□□ -1.88
CDCA3Q99618 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.28□□□□□ -1.88
CDCA3Q99618 CR381670.1-201ENST00000624291 1693 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.28□□□□□ -1.88
CDCA3Q99618 MIR22-201ENST00000362190 85 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 RNU6-500P-201ENST00000362349 107 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 RNU6-1181P-201ENST00000384191 106 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 RNU6-1207P-201ENST00000384343 107 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 RNU6-920P-201ENST00000410926 92 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 MTCO1P17-201ENST00000411522 491 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 RPL23AP39-201ENST00000415533 405 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 BX119904.4-201ENST00000424402 301 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.28□□□□□ -1.88
CDCA3Q99618 NEK4P1-201ENST00000433383 879 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.28□□□□□ -1.88
CDCA3Q99618 AC093156.1-201ENST00000440382 670 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 UBE2D3P4-201ENST00000441973 436 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.28□□□□□ -1.88
CDCA3Q99618 RPL30P6-201ENST00000475925 342 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 AP001025.2-201ENST00000490908 477 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 AC005178.1-201ENST00000508392 440 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 POU5F1P7-201ENST00000508759 541 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 MTND1P22-201ENST00000510572 951 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.28□□□□□ -1.88
CDCA3Q99618 MTCO1P47-201ENST00000523889 1271 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 AC087373.1-201ENST00000524920 491 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.28□□□□□ -1.88
CDCA3Q99618 AC013828.2-201ENST00000532487 235 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 AP004242.1-201ENST00000533701 349 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.28□□□□□ -1.88
CDCA3Q99618 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.28□□□□□ -1.88
CDCA3Q99618 AC109446.2-201ENST00000567872 497 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 AC012182.1-201ENST00000570133 895 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 AC010653.1-201ENST00000571108 881 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 AC034268.2-201ENST00000571784 482 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 AC011260.1-201ENST00000578420 472 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 AC008088.1-201ENST00000580993 280 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 MIR544B-201ENST00000582372 78 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.28□□□□□ -1.88
CDCA3Q99618 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.28□□□□□ -1.88
CDCA3Q99618 PRELID3BP8-201ENST00000604148 295 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 AC107294.1-201ENST00000609524 467 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 AL356266.1-201ENST00000623311 483 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.28□□□□□ -1.88
CDCA3Q99618 AC091931.1-201ENST00000623488 728 ntBASIC3.28□□□□□ -1.88
CDCA3Q99618 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.28□□□□□ -1.88
CDCA3Q99618 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.28□□□□□ -1.88
CDCA3Q99618 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CDCA3Q99618 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
CDCA3Q99618 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
CDCA3Q99618 AC021755.1-201ENST00000559747 1447 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CDCA3Q99618 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
CDCA3Q99618 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDCA3Q99618 RNU6-600P-201ENST00000362524 99 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 SNORA7.2-201ENST00000364446 145 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 RNA5SP189-201ENST00000364920 115 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.27□□□□□ -1.89
CDCA3Q99618 RNU6-1074P-201ENST00000383995 104 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 AL136116.1-201ENST00000403591 381 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 AL031577.2-201ENST00000404133 280 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 RN7SKP285-201ENST00000410137 318 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 RN7SKP266-201ENST00000410232 287 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.27□□□□□ -1.89
CDCA3Q99618 AL139413.1-201ENST00000421309 217 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.27□□□□□ -1.89
CDCA3Q99618 AL445669.1-201ENST00000426743 755 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.27□□□□□ -1.89
CDCA3Q99618 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.27□□□□□ -1.89
CDCA3Q99618 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.27□□□□□ -1.89
CDCA3Q99618 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.27□□□□□ -1.89
CDCA3Q99618 AC010468.1-201ENST00000461022 817 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 AC106872.3-201ENST00000495104 446 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 RPL23AP55-201ENST00000498163 452 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 AC004062.1-201ENST00000509926 645 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.27□□□□□ -1.89
CDCA3Q99618 AC017037.2-201ENST00000513850 890 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.27□□□□□ -1.89
CDCA3Q99618 RNU6-1073P-201ENST00000517182 106 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.27□□□□□ -1.89
CDCA3Q99618 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.27□□□□□ -1.89
CDCA3Q99618 AP004247.1-201ENST00000531556 1289 ntBASIC3.27□□□□□ -1.89
CDCA3Q99618 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.27□□□□□ -1.89
CDCA3Q99618 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.27□□□□□ -1.89
CDCA3Q99618 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.27□□□□□ -1.89
CDCA3Q99618 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms